RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 HTR3AP46098 478 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 SMSP52788 366 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 NCALDP61601 193 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 PON3Q15166 354 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 NPTX1Q15818 432 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 SGCBQ16585 318 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-206ENST00000412056 FAM156AQ8NDB6 213 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 OR52E4Q8NGH9 312 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 OR6T1Q8NGN1 323 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 FNDC9Q8TBE3 224 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-206ENST00000412056 RASSF5Q8WWW0 418 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 WNT2BQ93097 391 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 UCN2Q96RP3 112 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 SRXN1Q9BYN0 137 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 OR11A1Q9GZK7 315 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 EVA1AQ9H8M9 152 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 Q9UFV3 132 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 EGFL7Q9UHF1 273 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 ZC3H12DA2A288 527 aaKnown RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 SLC22A20A6NK97 555 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 AQP8O94778 261 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 HSD17B1P14061 328 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 SLC7A1P30825 629 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 BNIP2Q12982 314 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 CEACAM7Q14002 265 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 PPP4R4Q6NUP7 873 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 PROX1Q92786 737 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 OSTF1Q92882 214 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 FAM162AQ96A26 154 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 TPD52L3Q96J77 140 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 MCHR1Q99705 422 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 RPS6KB2Q9UBS0 482 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 BAG5Q9UL15 447 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF175Q9Y473 711 aa12.51□□□□□ -0.41
CPNE1-206ENST00000412056 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-206ENST00000412056 SYNGR4O95473 234 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 IL2RAP01589 272 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 CXCR1P25024 350 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 MSX2P35548 267 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-206ENST00000412056 CARD18P57730 90 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 OR1Q1Q15612 314 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF239Q16600 458 aaKnown RBP12.5□□□□□ -0.41
CPNE1-206ENST00000412056 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 XKRXQ6PP77 449 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 VTCN1Q7Z7D3 282 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 TSPYL5Q86VY4 417 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-206ENST00000412056 CARM1Q86X55 608 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 LIX1LQ8IVB5 337 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 ROBO4Q8WZ75 1007 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 PAQR5Q9NXK6 330 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-206ENST00000412056 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 SLC9A8Q9Y2E8 581 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 SH3GLB1Q9Y371 365 aa12.5□□□□□ -0.41
CPNE1-206ENST00000412056 GCN1Q92616 2671 aaKnown RBP12.5□□□□□ -0.41
CPNE1-206ENST00000412056 A0A0B4J2E0 115 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 A0A1B0GX12 115 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 A1L4Q6 167 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 ELOA3DA6NLF2 546 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-206ENST00000412056 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
CPNE1-206ENST00000412056 FAM90A27PA6NNH2 459 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF208O43345 1280 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 FMO6PO60774 539 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 RCBTB2O95199 551 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 ZNF682O95780 498 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 CLDN1O95832 211 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 SERPINA1P01009 418 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 TMIGD3P0DMS9 266 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-206ENST00000412056 KLK2P20151 261 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 AGAP20933 346 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 CHRNB4P30926 498 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 OR1E2P47887 323 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 DIO1P49895 249 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 AGFG1P52594 562 aaKnown RBP12.49□□□□□ -0.41
CPNE1-206ENST00000412056 SELENOWP63302 87 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 FOXF2Q12947 444 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 MYBPHQ13203 477 aa12.49□□□□□ -0.41
CPNE1-206ENST00000412056 HSPB2Q16082 182 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms