RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 XPO1O14980 1071 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ARPC1BO15143 372 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 KMOO15229 486 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRAPPC3O43617 180 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TM7SF2O76062 418 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 DFFBO76075 338 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 RASAL1O95294 804 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGHG1P01857 330 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CATP04040 527 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ATP5BP06576 529 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSPA1AP0DMV8 641 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSPA1BP0DMV9 641 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 LAMP1P11279 417 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 HARSP12081 509 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 BDNFP23560 247 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 EDNRAP25101 427 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 NTSR1P30989 418 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 STAT6P42226 847 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CXCL5P42830 114 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ARHGDIAP52565 204 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF138P52744 262 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CTBP2P56545 445 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 AP2B1P63010 937 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRPS9P82933 396 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 PRKCZQ05513 592 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 BCL2L1Q07817 233 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 DHRS2Q13268 280 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ITIH4Q14624 930 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 GANABQ14697 944 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZMYND11Q15326 602 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPR68Q15743 365 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 FSCN1Q16658 493 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CYP51A1Q16850 503 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 UGT8Q16880 541 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC27Q2M243 656 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 C17orf58Q2M2W7 97 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CNPY1Q3B7I2 92 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CFAP100Q494V2 611 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 H1FX-AS1Q4G0G2 97 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 AMOTQ4VCS5 1084 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC92Q53HC0 331 aaPredicted RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 EMC10Q5UCC4 262 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CARD17Q5XLA6 110 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ANO1Q5XXA6 986 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 NCAPH2Q6IBW4 605 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 HRCT1Q6UXD1 115 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 LINC00173Q6ZV60 143 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAEAQ7L5Y9 396 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SYT13Q7L8C5 426 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 VRK2Q86Y07 508 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLHDC8AQ8IYD2 350 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CACNA2D3Q8IZS8 1091 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 AFAP1L2Q8N4X5 818 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 COLGALT1Q8NBJ5 622 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR2AP1Q8NGE2 309 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC2A12Q8TD20 617 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 UBTD2Q8WUN7 234 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SCFD1Q8WVM8 642 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 WDR60Q8WVS4 1066 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SHC3Q92529 594 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 OSTF1Q92882 214 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 C11orf52Q96A22 123 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC51Q96ER9 411 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 DPH3Q96FX2 82 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 BSCL2Q96G97 398 aaPredicted RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TPD52L3Q96J77 140 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ELMO2Q96JJ3 720 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 LRGUKQ96M69 825 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 AIFM3Q96NN9 605 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 IPO9Q96P70 1041 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 QKIQ96PU8 341 aaKnown RBP eCLIP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 BBS4Q96RK4 519 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SRPK1Q96SB4 655 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 RASL11BQ9BPW5 248 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 EDEM2Q9BV94 578 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACE2Q9BYF1 805 aaPredicted RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC90BQ9GZT6 254 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAGT1Q9H0U3 335 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 LPAR5Q9H1C0 372 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TLNRD1Q9H1K6 362 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 PABPC3Q9H361 631 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 LIME1Q9H400 295 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 CWH43Q9H720 699 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 KAT8Q9H7Z6 458 aaKnown RBP-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 NIPAL2Q9H841 368 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 REEP1Q9H902 201 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ANKHQ9HCJ1 492 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRS2Q9HD23 443 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 HMG20AQ9NP66 347 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ABCB9Q9NP78 766 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 VTA1Q9NP79 307 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 C8orf4Q9NR00 106 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC22A11Q9NSA0 550 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TDP1Q9NUW8 608 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 THAP1Q9NVV9 213 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SMOXQ9NWM0 555 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACTR10Q9NZ32 417 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPG21Q9NZD8 308 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPRR3Q9UBC9 169 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 TP73-AS1Q9UF72 201 aa-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms