RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 SHISA5Q8N114 240 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 CDRT4Q8N9R6 151 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 FAM71CQ8NEG0 241 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 OR2T27Q8NH04 317 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 GIMAP1Q8WWP7 306 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 SLC25A38Q96DW6 304 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 IFT27Q9BW83 186 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 NMNAT2Q9BZQ4 307 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 LRRN3Q9H3W5 708 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 IL23AQ9NPF7 189 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 UCKL1Q9NWZ5 548 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 NUP50Q9UKX7 468 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
EPHA4-203ENST00000409938 MED31Q9Y3C7 131 aa7.22□□□□□ -1.25
EPHA4-203ENST00000409938 TRAV27A0A087WT01 109 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 RIIAD1A6NNX1 92 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 CYR61O00622 381 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 PIN1P1O15428 100 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 CTSVO60911 334 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 LDB3O75112 727 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 PAK4O96013 591 aaPredicted RBP7.21□□□□□ -1.25
EPHA4-203ENST00000409938 AK1P00568 194 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 HPXP02790 462 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 ADRB1P08588 477 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 H2AFB2P0C5Z0 115 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 ZNF3P17036 446 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 ACVR1BP36896 505 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 PUDPQ08623 228 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 PDGFRLQ15198 375 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 GPR68Q15743 365 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 TMEM255AQ5JRV8 349 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 ARHGAP11AQ6P4F7 1023 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 TIGD4Q8IY51 512 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 TMEM52Q8NDY8 209 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 OR14A16Q8NHC5 309 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 RSC1A1Q92681 617 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 NRIP3Q9NQ35 241 aa7.21□□□□□ -1.25
EPHA4-203ENST00000409938 CXXC1Q9P0U4 656 aaPredicted RBP7.21□□□□□ -1.25
EPHA4-203ENST00000409938 ZNF624Q9P2J8 865 aaPredicted RBP7.21□□□□□ -1.25
EPHA4-203ENST00000409938 A6NCN8 305 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 TUBAL3A6NHL2 446 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 PLRG1O43660 514 aaKnown RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 NKX2-2O95096 273 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 PPP1R3DO95685 299 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 PDGFAP04085 211 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 CSRP1P21291 193 aaKnown RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 GDI2P50395 445 aaKnown RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ACTA2P62736 377 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ACTG2P63267 376 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 MFSD13AQ14CX5 517 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 KLHL12Q53G59 568 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 FAM69AQ5T7M9 428 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 OLFML2AQ68BL7 652 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 FCRLBQ6BAA4 426 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 RPL22L1Q6P5R6 122 aaKnown RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 MTSS1LQ765P7 747 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 NLRC3Q7RTR2 1065 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 KRT74Q7RTS7 529 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ZAR1Q86SH2 424 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 EID2Q8N6I1 236 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ZNRF4Q8WWF5 429 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 SMARCD2Q92925 531 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 NACC2Q96BF6 587 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 MYADMQ96S97 322 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ORAI3Q9BRQ5 295 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 ZNF436Q9C0F3 470 aaPredicted RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 DNAJB12Q9NXW2 375 aaKnown RBP7.21□□□□□ -1.26
EPHA4-203ENST00000409938 MAT2BQ9NZL9 334 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 PIPOXQ9P0Z9 390 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 TBC1D29Q9UFV1 150 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 TEKT2Q9UIF3 430 aa7.21□□□□□ -1.26
EPHA4-203ENST00000409938 LOC105369274A0A096LPK9 316 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 ZSCAN5BA6NJL1 495 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 OR6C65A6NJZ3 312 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 FLRT2O43155 660 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 PCDH8O95206 1070 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 MT-ND4P03905 459 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 RRASP10301 218 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 PYCR1P32322 319 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 CTNNB1P35222 781 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 SELENOPP49908 381 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 CCR9P51686 369 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 PPP2CBP62714 309 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 RPS21P63220 83 aaKnown RBP7.2□□□□□ -1.26
EPHA4-203ENST00000409938 PPP2CAP67775 309 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 SIRPAP78324 504 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 SIM1P81133 766 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-203ENST00000409938 HSF2Q03933 536 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 EXOSC2Q13868 293 aaKnown RBP7.2□□□□□ -1.26
EPHA4-203ENST00000409938 SUZ12Q15022 739 aaKnown RBP7.2□□□□□ -1.26
EPHA4-203ENST00000409938 ISXQ2M1V0 245 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 STPG1Q5TH74 334 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 RTL4Q6ZR62 310 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 SPRED2Q7Z698 418 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 OR4N5Q8IXE1 308 aa7.2□□□□□ -1.26
EPHA4-203ENST00000409938 CMTM4Q8IZR5 234 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms