RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 MMP26Q9NRE1 261 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 UQCC1Q9NVA1 299 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 COMMD9Q9P000 198 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TAAR2Q9P1P5 351 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TNFSF18Q9UNG2 199 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NOD1Q9Y239 953 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TRAV14DV4A0A0A6YYC5 116 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACOD1A6NK06 481 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 WASH3PC4AMC7 463 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 E9PI62 339 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TXNL1O43396 289 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 LILRB5O75023 590 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GBAP04062 536 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CSF1P09603 554 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 UCHL1P09936 223 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NR2F1P10589 423 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NDUFV2P19404 249 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 AGAP20933 346 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 DCTDP32321 178 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PMELP40967 661 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CSNK1EP49674 416 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RAB5CP51148 216 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 LSM11P83369 360 aaKnown RBP eCLIP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ARF5P84085 180 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 MRPL58Q14197 206 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GPNMBQ14956 572 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SDHAF4Q5VUM1 108 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF620Q6ZNG0 422 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACOT7LQ6ZUV0 252 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PARGQ86W56 976 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GTPBP8Q8N3Z3 284 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF565Q8N9K5 539 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 KLHDC9Q8NEP7 349 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 C1orf216Q8TAB5 229 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 STOML3Q8TAV4 291 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PHOSPHO2Q8TCD6 241 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 STK35Q8TDR2 534 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACOT11Q8WXI4 607 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 C4orf36Q96KX1 117 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TBX5Q99593 518 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PINK1Q9BXM7 581 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TEX101Q9BY14 249 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 XKR8Q9H6D3 395 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TREM1Q9NP99 234 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 DMRT3Q9NQL9 472 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 UPB1Q9UBR1 384 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 IGLV3-16A0A075B6K0 115 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 GLTPD2A6NH11 291 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 J3QLW9 94 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PMS2P2O95744 297 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PRG2P13727 222 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF44P15621 663 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF19P17023 458 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ACVR1BP36896 505 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PTH2RP49190 550 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 AKR1C2P52895 323 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 RAB4BP61018 213 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 AKR1C1Q04828 323 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 RNF219Q5W0B1 726 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 SSX9Q7RTT3 188 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 VRK3Q8IV63 474 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 C17orf47Q8NEP4 570 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 RNF141Q8WVD5 230 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CPNE4Q96A23 557 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 EFCAB11Q9BUY7 163 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 TXNRD2Q9NNW7 524 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 FOXJ3Q9UPW0 622 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 RPH3AQ9Y2J0 694 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 AK6Q9Y3D8 172 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CHD5Q8TDI0 1954 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 C17orf113A0A1B0GUU1 675 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 GGT3PA6NGU5 568 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 TBX19O60806 448 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CLN5O75503 358 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CXCL14O95715 111 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 MT-ND4LP03901 98 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CD1AP06126 327 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 KLK1P06870 262 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF14P17017 642 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 RCC1P18754 421 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PPT1P50897 306 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ANXA11P50995 505 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF157P51786 506 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PNLIPRP2P54317 469 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CBFBQ13951 182 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 CDKN3Q16667 212 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 DECR1Q16698 335 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 C4orf46Q504U0 113 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PRPF38BQ5VTL8 546 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 C11orf87Q6NUJ2 197 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 FAAP20Q6NZ36 180 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 PLBD1Q6P4A8 553 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 ZCCHC12Q6PEW1 402 aa5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 BOLLQ8N9W6 283 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-202ENST00000409478 OR56A3Q8NH54 315 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms