RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 MAN2C1Q9NTJ4 1040 aa11.78□□□□□ -0.52
LIMS2-203ENST00000409254 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
LIMS2-203ENST00000409254 VDAC3Q9Y277 283 aa11.78□□□□□ -0.52
LIMS2-203ENST00000409254 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
LIMS2-203ENST00000409254 V9GYQ6 96 aa11.78□□□□□ -0.52
LIMS2-203ENST00000409254 INTS1Q8N201 2190 aaKnown RBP11.78□□□□□ -0.52
LIMS2-203ENST00000409254 SMG1Q96Q15 3661 aaKnown RBP11.78□□□□□ -0.52
LIMS2-203ENST00000409254 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.52
LIMS2-203ENST00000409254 TMED7-TICAM2A0A0A6YYA0 188 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 CPSF4LA6NMK7 179 aaKnown RBP11.77□□□□□ -0.53
LIMS2-203ENST00000409254 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 A8MVM7 634 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 CLOCKO15516 846 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 OR2T1O43869 369 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 ENTPD5O75356 428 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 GADD45GO95257 159 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 LYPD3O95274 346 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 LDLRP01130 860 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 CPN1P15169 458 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 TACR3P29371 465 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 LIMS1P48059 325 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 CDH12P55289 794 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 PIN1Q13526 163 aaPredicted RBP11.77□□□□□ -0.53
LIMS2-203ENST00000409254 SF3B4Q15427 424 aaKnown RBP eCLIP11.77□□□□□ -0.53
LIMS2-203ENST00000409254 TOMM34Q15785 309 aaPredicted RBP11.77□□□□□ -0.53
LIMS2-203ENST00000409254 SYT14P1Q58G82 188 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 RNFT1Q5M7Z0 435 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 ESPNLQ6ZVH7 1005 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 GDF7Q7Z4P5 450 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 SVOPLQ8N434 492 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 POC1BQ8TC44 478 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 SARAFQ96BY9 339 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 FUZQ9BT04 418 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 S100A14Q9HCY8 104 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 SLC7A7Q9UM01 511 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 TMEM5Q9Y2B1 443 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 TMED7Q9Y3B3 224 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 LYVE1Q9Y5Y7 322 aa11.77□□□□□ -0.53
LIMS2-203ENST00000409254 H3BNX3 289 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 BCKDKO14874 412 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 MT-ATP6P00846 226 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 FPR1P21462 350 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 RRM2P31350 389 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 DNAJA1P31689 397 aaKnown RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 IFNGR2P38484 337 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 RNF144AP50876 292 aaPredicted RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 CTBP2P56545 445 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 HOXC5Q00444 222 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 PMP22Q01453 160 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 SPIBQ01892 262 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TOMM20Q15388 145 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 ANKDD1AQ495B1 522 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 VASNQ6EMK4 673 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TSPYL5Q86VY4 417 aaPredicted RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 ADGRG3Q86Y34 549 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 SLC7A13Q8TCU3 470 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 PYDC1Q8WXC3 89 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 CENPNQ96H22 339 aaPredicted RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 PRSS27Q9BQR3 290 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 CTPS2Q9NRF8 586 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 STX18Q9P2W9 335 aaKnown RBP11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TMCC3Q9ULS5 477 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 TRAPPC4Q9Y296 219 aa11.76□□□□□ -0.53
LIMS2-203ENST00000409254 PMS2P2O95744 297 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 MT-ND1P03886 318 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 THY1P04216 161 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 HOXD4P09016 255 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 EDN3P14138 238 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF708P17019 499 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 PTGER4P35408 488 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 RFC3P40938 356 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 LHX2P50458 406 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 ARHGDIAP52565 204 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 CSNK2A1P68400 391 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 CRYZQ08257 329 aaKnown RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 LY6DQ14210 128 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 WIPI1Q5MNZ9 446 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 DCST1Q5T197 706 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 FAM69AQ5T7M9 428 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 YRDCQ86U90 279 aaKnown RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 HIPK1Q86Z02 1210 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 PQLC1Q8N2U9 271 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 OR4C15Q8NGM1 316 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 TMEM239Q8WW34 195 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 ABTB1Q969K4 478 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 KLHL15Q96M94 604 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 KLHDC3Q9BQ90 382 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 PRDM14Q9GZV8 571 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 LDAHQ9H6V9 325 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 RRP15Q9Y3B9 282 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms