RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ITGADQ13349 1161 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 P2RY6Q15077 328 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 TAB1Q15750 504 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 Q5PR19 223 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 MRPL2Q5T653 305 aaKnown RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 SHEQ5VZ18 495 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 ATG4DQ86TL0 474 aaPredicted RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 MTDHQ86UE4 582 aaKnown RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 P3H2Q8IVL5 708 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 CMIPQ8IY22 773 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 KISS1RQ969F8 398 aaPredicted RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 AURKBQ96GD4 344 aaPredicted RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 SMR3AQ99954 134 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 TMEM204Q9BSN7 226 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 RLIMQ9NVW2 624 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 SPIN1Q9Y657 262 aaPredicted RBP17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 USH1CQ9Y6N9 552 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF724A8MTY0 619 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 FOSL1P15407 271 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 POLR2JP52435 117 aaKnown RBP17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 AGBL2Q5U5Z8 902 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 ABLIM2Q6H8Q1 611 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 EPGNQ6UW88 154 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 Q6ZT83 130 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 PERPQ96FX8 193 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 TPT1P8Q9HAU6 139 aa17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 NSD1Q96L73 2696 aaPredicted RBP17.08■□□□□ 0.32
SMARCB1-204ENST00000407422 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 RAMP1O60894 148 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 LYZL6O75951 148 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ANP32DO95626 131 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 PMS2P2O95744 297 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 DBIP07108 87 aaKnown RBP17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 CRATP43155 626 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 BHLHA15Q7RTS1 189 aaPredicted RBP17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 GALNT5Q7Z7M9 940 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 VRK2Q86Y07 508 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 CCDC103Q8IW40 242 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 LRRC75A-AS1Q8N1F1 130 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ITCHQ96J02 903 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 SLCO1B3Q9NPD5 702 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 P2RX2Q9UBL9 471 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 OSGIN1Q9UJX0 560 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 HDGFL3Q9Y3E1 203 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 TLN2Q9Y4G6 2542 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 IGKV3D-15A0A087WSY6 115 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 TMED7-TICAM2A0A0A6YYA0 188 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF716A6NP11 495 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ARHGEF9O43307 516 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ZCCHC18P0CG32 403 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 TACR3P29371 465 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 NTF4P34130 210 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 C6orf10Q5SRN2 563 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 SEZ6L2Q6UXD5 910 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF100Q8IYN0 542 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 MIER2Q8N344 545 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 SLC38A5Q8WUX1 472 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 IGFBPL1Q8WX77 278 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 HSD17B8Q92506 261 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 RMND5AQ9H871 391 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 TMED7Q9Y3B3 224 aa17.07■□□□□ 0.32
SMARCB1-204ENST00000407422 TMEM72A0PK05 275 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 CFAP73A6NFT4 308 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 IGHV3-9P01782 118 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 BCHEP06276 602 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 TFPTP0C1Z6 253 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 IGHV1-2P23083 117 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 SLC1A3P43003 542 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 HTR3AP46098 478 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 OR2B6P58173 313 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 EPS8Q12929 822 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 GNA13Q14344 377 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 CAPRIN1Q14444 709 aaKnown RBP17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 RPS26P11Q5JNZ5 115 aaPredicted RBP17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 MSANTD1Q6ZTZ1 278 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 PEX5LQ8IYB4 626 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 OR52P1PQ8NH57 321 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 AKAP1Q92667 903 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 PMM1Q92871 262 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 C18orf12Q96KH6 178 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 C7orf26Q96N11 449 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 DSPPQ9NZW4 1301 aa17.06■□□□□ 0.32
SMARCB1-204ENST00000407422 ZC3H12DA2A288 527 aaKnown RBP17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 FAM234BA2RU67 622 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 FAAHO00519 579 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 HS3ST1O14792 307 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 IMPDH2P12268 514 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 FKBP2P26885 142 aaKnown RBP17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 CLK1P49759 484 aaKnown RBP17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 DSTNP60981 165 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 PDK3Q15120 406 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 SLC2A7Q6PXP3 512 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF836Q6ZNA1 936 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 LILRB1Q8NHL6 650 aaPredicted RBP17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 GTF2H4Q92759 462 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 ZHX1-C8orf76Q96EF9 292 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms