RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CEACAM19Q7Z692 300 aa15.48■□□□□ 0.07
NUP50-203ENST00000407019 TPRA1Q86W33 373 aa15.48■□□□□ 0.07
NUP50-203ENST00000407019 Q8N9G6 341 aaPredicted RBP15.48■□□□□ 0.07
NUP50-203ENST00000407019 C17orf47Q8NEP4 570 aa15.48■□□□□ 0.07
NUP50-203ENST00000407019 SMAP2Q8WU79 429 aaPredicted RBP15.48■□□□□ 0.07
NUP50-203ENST00000407019 ZNF578Q96N58 590 aaPredicted RBP15.48■□□□□ 0.07
NUP50-203ENST00000407019 UBL7Q96S82 380 aaPredicted RBP15.48■□□□□ 0.07
NUP50-203ENST00000407019 PPIL3Q9H2H8 161 aaKnown RBP15.48■□□□□ 0.07
NUP50-203ENST00000407019 LRIT1Q9P2V4 623 aa15.48■□□□□ 0.07
NUP50-203ENST00000407019 CLDN16Q9Y5I7 305 aa15.48■□□□□ 0.07
NUP50-203ENST00000407019 SERINC4A6NH21 518 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 A8MV72 311 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 ZNF749O43361 778 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 CSTAP01040 98 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 CT45A8P0DMV1 189 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 CT45A9P0DMV2 189 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 HIST1H1CP16403 213 aaKnown RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 CAPZBP47756 277 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 SF3A2Q15428 464 aaKnown RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 CT45A2Q5DJT8 189 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 FAM27D1Q5T7N8 215 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 DMKNQ6E0U4 476 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 SSX6Q7RTT6 188 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 BCORP1Q8N888 145 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 OR5J2Q8NH18 312 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 OR4K13Q8NH42 304 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 C16orf52Q8NHV5 167 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 SLC7A6Q92536 515 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 PGLYRP3Q96LB9 341 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 ORAI3Q9BRQ5 295 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 NOX1Q9Y5S8 564 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 IER3IP1Q9Y5U9 82 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 SZT2Q5T011 3432 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 LYRM1O43325 122 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 PROS1P07225 676 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 MAOAP21397 527 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 PYCR1P32322 319 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 NRG3P56975 720 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 IFITM2Q01629 132 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 FUT7Q11130 342 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 SF3B4Q15427 424 aaKnown RBP eCLIP15.47■□□□□ 0.074e-8■■■■■ 40.5
NUP50-203ENST00000407019 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 SFXN4Q6P4A7 337 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 RPTNQ6XPR3 784 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 LRRC28Q86X40 367 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 ARL14Q8N4G2 192 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 ZMYND19Q96E35 227 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 OR10A5Q9H207 317 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 TP63Q9H3D4 680 aaPredicted RBP15.47■□□□□ 0.07
NUP50-203ENST00000407019 ENAMQ9NRM1 1142 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 ICAM5Q9UMF0 924 aa15.47■□□□□ 0.07
NUP50-203ENST00000407019 A0A087WUJ7 227 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 A0A0B4J293 547 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 TTC36A6NLP5 189 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 MCIDASD6RGH6 385 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 PPM1BO75688 479 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 SC5DO75845 299 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 PSKH1P11801 424 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 THBS2P35442 1172 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 ACVR1BP36896 505 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 TALDO1P37837 337 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 MLLT3P42568 568 aaPredicted RBP15.46■□□□□ 0.07
NUP50-203ENST00000407019 FASLGP48023 281 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 PXKQ7Z7A4 578 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 POMGNT2Q8NAT1 580 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 DUSP18Q8NEJ0 188 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 FAM174AQ8TBP5 190 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 RNF31Q96EP0 1072 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 MMABQ96EY8 250 aaPredicted RBP15.46■□□□□ 0.07
NUP50-203ENST00000407019 MSANTD3Q96H12 275 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 SNX18Q96RF0 628 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 CNN2Q99439 309 aaKnown RBP15.46■□□□□ 0.07
NUP50-203ENST00000407019 KCNJ15Q99712 375 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 TTYH2Q9BSA4 534 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 CYSLTR2Q9NS75 346 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 ST6GALNAC2Q9UJ37 374 aa15.46■□□□□ 0.07
NUP50-203ENST00000407019 OR2W5A6NFC9 320 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 IFNA16P05015 189 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 RPL4P36578 427 aaKnown RBP15.45■□□□□ 0.06
NUP50-203ENST00000407019 OR10A3P58181 314 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ACTA2P62736 377 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ACTG2P63267 376 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 GGTLC2Q14390 218 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ELOCQ15369 112 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 IL20RBQ6UXL0 311 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 TRILQ7L0X0 811 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 MS4A15Q8N5U1 240 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 METTL27Q8N6F8 245 aaPredicted RBP15.45■□□□□ 0.06
NUP50-203ENST00000407019 OR4C3Q8NH37 302 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 UBASH3BQ8TF42 649 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 TP53INP1Q96A56 240 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 DMRTB1Q96MA1 342 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ZNF285Q96NJ3 590 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 NUFIP1Q9UHK0 495 aaKnown RBP15.45■□□□□ 0.06
NUP50-203ENST00000407019 PLCL2Q9UPR0 1127 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 RASD1Q9Y272 281 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 A0A0G2JMP0 313 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 A0A0X1KG70 313 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 FAM240BA0A1B0GVZ2 78 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 CENPXA8MT69 81 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms