RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 OR2A12Q8NGT7 310 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 ZNF334Q9HCZ1 680 aaPredicted RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 LTBP3Q9NS15 1303 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 TRA2BP62995 288 aaKnown RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 NFATC3Q12968 1075 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 GPR18Q14330 331 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 C18orf21Q32NC0 220 aaPredicted RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 ACSM3Q53FZ2 586 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 MANEAQ5SRI9 462 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 C1QTNF2Q9BXJ5 285 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 CPNE5Q9HCH3 593 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SLC6A20Q9NP91 592 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 PLEKHM1Q9Y4G2 1056 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 KDM4EB2RXH2 506 aaPredicted RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 HSPB6O14558 160 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 AGPAT2O15120 278 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SULT1B1O43704 296 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 CRHBPP24387 322 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 RAB5CP51148 216 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 HBG1P69891 147 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 HBG2P69892 147 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 CD163Q86VB7 1156 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 TOE1Q96GM8 510 aaKnown RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 HEBP1Q9NRV9 189 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 C17orf112F2Z3M2 114 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 MSTNO14793 375 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 CD6P30203 668 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 ARSDP51689 593 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SEC61A1P61619 476 aaKnown RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 TMEM184AQ6ZMB5 413 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 CYS1Q717R9 158 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SLC41A2Q96JW4 573 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SLC25A18Q9H1K4 315 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 HHLA2Q9UM44 414 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 SLX4Q8IY92 1834 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 TACR3P29371 465 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 ERVK-25P63136 954 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 ATPAF1Q5TC12 328 aaPredicted RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 MOB3CQ70IA8 216 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
SMCR8-201ENST00000406438 GPR150Q8NGU9 434 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
SMCR8-201ENST00000406438 A0A1W2PPH5 198 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 F2RP25116 425 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 CLVS2Q5SYC1 327 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 PPP1R3BQ86XI6 285 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 DCAF13Q9NV06 445 aaKnown RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 LRP6O75581 1613 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 OR5K3A6NET4 321 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 AP1G1O43747 822 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 MTHFD2P13995 350 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 GJA5P36382 358 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 CXCL12P48061 93 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 CLDN2P57739 230 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 COL9A2Q14055 689 aaPredicted RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 SERPINA12Q8IW75 414 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 ZNF436Q9C0F3 470 aaPredicted RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 BCKDHBP21953 392 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 CA5AP35218 305 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 IDUAP35475 653 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 LBX1P52954 281 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 TCTN2Q96GX1 697 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 IL26Q9NPH9 171 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 C1orf123Q9NWV4 160 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 SNNO75324 88 aaPredicted RBP11.28□□□□□ -0.6
SMCR8-201ENST00000406438 TGM6O95932 706 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 BMP2P12643 396 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 FAPQ12884 760 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 SLC14A1Q13336 389 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 VEZF1Q14119 521 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 IRF4Q15306 451 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 ENTPD8Q5MY95 495 aa11.28□□□□□ -0.6
SMCR8-201ENST00000406438 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms