RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ITPKBP27987 946 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ANGPT1Q15389 498 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 INPP5JQ15735 1006 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 C10orf53Q8N6V4 93 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 CLDN22Q8N7P3 220 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 FAM71CQ8NEG0 241 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 FCGR1BQ92637 280 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 RASD2Q96D21 266 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 KTI12Q96EK9 354 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ZNF649Q9BS31 505 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 MARCH7Q9H992 704 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 COL27A1Q8IZC6 1860 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 BLOC1S5-TXNDC5H3BN57 136 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ADAM10O14672 748 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 TOX3O15405 576 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 MAGEB3O15480 346 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 TACR3P29371 465 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 IDUAP35475 653 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 MPLP40238 635 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 EMP2P54851 167 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 COPZ1P61923 177 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ERVK-25P63136 954 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SLC25A30Q5SVS4 291 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 PAPD4Q6PIY7 484 aaKnown RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 SLC29A4Q7RTT9 530 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 OR52L1Q8NGH7 329 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 DUSP19Q8WTR2 217 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 TP53INP1Q96A56 240 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 ERMAPQ96PL5 475 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 C14orf105Q9NVL8 296 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SRPK3Q9UPE1 567 aa12.84□□□□□ -0.35
PRAME-205ENST00000405655 SPIN1Q9Y657 262 aaPredicted RBP12.84□□□□□ -0.35
PRAME-205ENST00000405655 FREM3P0C091 2139 aa12.83□□□□□ -0.35
PRAME-205ENST00000405655 TRBV11-1A0A0K0K1C0 115 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 LNP1A1A4G5 178 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 MYL12BO14950 172 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 SLC22A1O15245 554 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 CER1O95813 267 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 HIST1H1CP16403 213 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 AQP2P41181 271 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 SERPINB10P48595 397 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 LIMK1P53667 647 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 RPS7P62081 194 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 SF3A2Q15428 464 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 NIPAL3Q6P499 406 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 OVCH1Q7RTY7 1134 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 LNX2Q8N448 690 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 BMPERQ8N8U9 685 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 OR52E2Q8NGJ4 325 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 PMM1Q92871 262 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 NAT6Q93015 286 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 KISS1RQ969F8 398 aaPredicted RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 CRB3Q9BUF7 120 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 OSGIN1Q9UJX0 560 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 IGLV3-12A0A075B6K2 115 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 ELOA3DA6NLF2 546 aaPredicted RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 NTN3O00634 580 aaPredicted RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 PLD2O14939 933 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 F13BP05160 661 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 MXD1Q05195 221 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 ITGADQ13349 1161 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 ELOA3BQ3SY89 546 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 SYT14Q8NB59 555 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 TOR1AIP2Q8NFQ8 470 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 ELOA3Q8NG57 546 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 RHBDD1Q8TEB9 315 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 SECISBP2Q96T21 854 aaKnown RBP12.83□□□□□ -0.36
PRAME-205ENST00000405655 TIMP4Q99727 224 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 TGIF2Q9GZN2 237 aa12.83□□□□□ -0.36
PRAME-205ENST00000405655 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 CCDC182A6NF36 153 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 H7C1C5 153 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 CCRL2O00421 344 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 NDUFB5O43674 189 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 SCG5P05408 212 aa12.82□□□□□ -0.36
PRAME-205ENST00000405655 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms