RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 H0Y3Z8 333 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 WDR1O75083 606 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 CCNA2P20248 432 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 CDH12P55289 794 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 FLOT2Q14254 428 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 EIF2S3LQ2VIR3 472 aaKnown RBP26.4■■□□□ 1.82
USP42-202ENST00000404008 CTU2Q2VPK5 515 aaKnown RBP26.4■■□□□ 1.82
USP42-202ENST00000404008 SWT1Q5T5J6 900 aaKnown RBP26.4■■□□□ 1.82
USP42-202ENST00000404008 ESPNLQ6ZVH7 1005 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 SLC38A4Q969I6 547 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 SLC47A1Q96FL8 570 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 ADGRG7Q96K78 797 aa26.4■■□□□ 1.82
USP42-202ENST00000404008 TP63Q9H3D4 680 aaPredicted RBP26.4■■□□□ 1.82
USP42-202ENST00000404008 TRAPPC13A5PLN9 417 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 FIGNL2A6NMB9 653 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 EIF1AYO14602 144 aaKnown RBP26.39■■□□□ 1.82
USP42-202ENST00000404008 ADAMDEC1O15204 470 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 ZNF208O43345 1280 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 THY1P04216 161 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 PNMTP11086 282 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 FKBP2P26885 142 aaKnown RBP26.39■■□□□ 1.82
USP42-202ENST00000404008 CA7P43166 264 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 TMEM176BQ3YBM2 270 aaPredicted RBP26.39■■□□□ 1.82
USP42-202ENST00000404008 SYT14P1Q58G82 188 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 TSEN54Q7Z6J9 526 aaKnown RBP26.39■■□□□ 1.82
USP42-202ENST00000404008 UTP4Q969X6 686 aaKnown RBP26.39■■□□□ 1.82
USP42-202ENST00000404008 C7orf34Q96L11 122 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 ALKBH4Q9NXW9 302 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 SELENONQ9NZV5 590 aa26.39■■□□□ 1.82
USP42-202ENST00000404008 ESPL1Q14674 2120 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 ARHGAP21Q5T5U3 1957 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 A0A0J9YW62 118 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 AHRRA9YTQ3 701 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 PYCARD-AS1I3L0S3 204 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 LYPD3O95274 346 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 GABRA1P14867 456 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 CASP6P55212 293 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 TAS2R41P59536 307 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 PIN1Q13526 163 aaPredicted RBP26.38■■□□□ 1.81
USP42-202ENST00000404008 PRR7Q8TB68 274 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 ZPLD1Q8TCW7 415 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 POP5Q969H6 163 aaKnown RBP26.38■■□□□ 1.81
USP42-202ENST00000404008 TUBA1CQ9BQE3 449 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 OR11A1Q9GZK7 315 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 SH3BGRL2Q9UJC5 107 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 A4GNTQ9UNA3 340 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 MPDZO75970 2070 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 KIAA1549Q9HCM3 1950 aa26.38■■□□□ 1.81
USP42-202ENST00000404008 TRGV8A0A0C4DH27 118 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ELOA3DA6NLF2 546 aaPredicted RBP26.37■■□□□ 1.81
USP42-202ENST00000404008 AQP12BA6NM10 295 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 TNFSF11O14788 317 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 CHP2O43745 196 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 OR5F1O95221 314 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ACVR2AP27037 513 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ZSCAN26Q16670 478 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ELOA3BQ3SY89 546 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 C1QL3Q5VWW1 255 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 AQP12AQ8IXF9 295 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ELOA3Q8NG57 546 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 OR2V1Q8NHB1 315 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 RELTQ969Z4 430 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 DDIT4LQ96D03 193 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 PRRC1Q96M27 445 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 ENPP4Q9Y6X5 453 aa26.37■■□□□ 1.81
USP42-202ENST00000404008 A0A087WUJ7 227 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 SLC7A1P30825 629 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 PTGER4P35408 488 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 CLK1P49759 484 aaKnown RBP26.36■■□□□ 1.81
USP42-202ENST00000404008 VLDLRP98155 873 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 ACSF3Q4G176 576 aaPredicted RBP26.36■■□□□ 1.81
USP42-202ENST00000404008 RTL6Q6ICC9 239 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 C3P1Q6ZMU1 363 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 GDF7Q7Z4P5 450 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 SLC41A3Q96GZ6 507 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 OR5B2Q96R09 309 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 COQ10BQ9H8M1 238 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 NDUFAF4Q9P032 175 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 RIMS3Q9UJD0 308 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 SLC7A7Q9UM01 511 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 FAM215AQ9Y5M1 114 aa26.36■■□□□ 1.81
USP42-202ENST00000404008 PHF3Q92576 2039 aaKnown RBP26.35■■□□□ 1.81
USP42-202ENST00000404008 ZC3H12DA2A288 527 aaKnown RBP26.35■■□□□ 1.81
USP42-202ENST00000404008 A8MVM7 634 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 J3KTA2 159 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 HOXD4P09016 255 aaPredicted RBP26.35■■□□□ 1.81
USP42-202ENST00000404008 TFPIP10646 304 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 YAP1P46937 504 aaKnown RBP26.35■■□□□ 1.81
USP42-202ENST00000404008 RPS3AP61247 264 aaKnown RBP26.35■■□□□ 1.81
USP42-202ENST00000404008 SF3B4Q15427 424 aaKnown RBP eCLIP26.35■■□□□ 1.814e-6■□□□□ 9.9
USP42-202ENST00000404008 C1orf185Q5T7R7 199 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 HBMQ6B0K9 141 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 LINC00114Q6XXX2 140 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 ADGRE4PQ86SQ3 457 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 OR10D3Q8NH80 312 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 RNF217Q8TC41 542 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 ARL5BQ96KC2 179 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 SEPHS2Q99611 448 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 MAGIXQ9H6Y5 334 aa26.35■■□□□ 1.81
USP42-202ENST00000404008 FLNCQ14315 2725 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms