RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF641Q96N77 438 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 SERPINB12Q96P63 405 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 P2RY13Q9BPV8 354 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRRC61Q9BV99 259 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIM15Q9C019 465 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 IL22Q9GZX6 179 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 NEUROG2Q9H2A3 272 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 KCNK13Q9HB14 408 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 PLEKHA3Q9HB20 300 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 S100A14Q9HCY8 104 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 SUN2Q9UH99 717 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 MUTYHQ9UIF7 546 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 DUSP12Q9UNI6 340 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 PLA2G4CQ9UP65 541 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ERVW-1Q9UQF0 538 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TECTAO75443 2155 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 GON4LQ3T8J9 2241 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TP53BP1Q12888 1972 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 IGHV4-30-2A0A087WSY4 118 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TSPAN11A1L157 253 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 SHISA7A6NL88 538 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 E9PQ18 207 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 K7ERQ8 282 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 NTN3O00634 580 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRAFD1O14545 582 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 INPP4BO15327 924 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ATP8B1O43520 1251 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 GMNNO75496 209 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 SPAG6O75602 509 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TTC4O95801 387 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 FGF1P05230 155 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ABHD2P08910 425 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 GSTA2P09210 222 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CD1DP15813 335 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF10P21506 573 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CD86P42081 329 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAGEA4P43358 317 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 RGRP47804 291 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 STK19P49842 368 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CCNHP51946 323 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ABCE1P61221 599 aaKnown RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAXP61244 160 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ERVK-16P61578 105 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 BCL2L1Q07817 233 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 NPRL3Q12980 569 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPA4Q13156 261 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 GK2Q14410 553 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ELAVL3Q14576 367 aaKnown RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 IHHQ14623 411 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MLF2Q15773 248 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CARD16Q5EG05 197 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 DNAJC21Q5F1R6 531 aaKnown RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ANKRD22Q5VYY1 191 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CAPN13Q6MZZ7 669 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CNTN4Q8IWV2 1026 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF440Q8IYI8 595 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 UBALD2Q8IYN6 164 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CCDC197Q8NCU1 140 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAPK1IP1LQ8NDC0 245 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 IPMKQ8NFU5 416 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR2A12Q8NGT7 310 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 CHPT1Q8WUD6 406 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 ECHDC3Q96DC8 303 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TTC25Q96NG3 672 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIB3Q96RU7 358 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 RANBP9Q96S59 729 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 EBNA1BP2Q99848 306 aaKnown RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 SSX3Q99909 188 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TBL1YQ9BQ87 522 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TMEM245Q9H330 911 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRABDQ9H4I3 376 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 VIPAS39Q9H9C1 493 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MRM3Q9HC36 420 aaKnown RBP4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 MED17Q9NVC6 651 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 PLEK2Q9NYT0 353 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 BFARQ9NZS9 450 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 KCNK6Q9Y257 313 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 PPIL1Q9Y3C6 166 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TEX264Q9Y6I9 313 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIOO75962 3097 aa4.06□□□□□ -1.76
HMGB3P19-201ENST00000403971 PCM1Q15154 2024 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FANCMQ8IYD8 2048 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 THADAQ6YHU6 1953 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 KNL1Q8NG31 2342 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 HEATR9A2RTY3 570 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 GOLGA8MH3BSY2 632 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 K7EQS6 105 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 CPNE6O95741 557 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 AGTP01019 485 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ANPEPP15144 967 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 GPX3P22352 226 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PKLRP30613 574 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 VEGFCP49767 419 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 STARD6P59095 220 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ACVR1Q04771 509 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 KDSRQ06136 332 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 CD300CQ08708 224 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 RBBP4Q09028 425 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PDIA2Q13087 525 aaKnown RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 MSLNQ13421 630 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms