RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 LOC105369274A0A096LPK9 316 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 LOC105371267A0A1B0GV96 52 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 B8ZZF3 427 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 GPR171O14626 319 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 CTDSPLO15194 276 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 KCNJ13O60928 360 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 ZNF888P0CJ79 500 aaPredicted RBP18.29■□□□□ 0.52
CCDC47-202ENST00000403162 EPXP11678 715 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 ATF1P18846 271 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 HSF2Q03933 536 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 DBPQ10586 325 aaPredicted RBP18.29■□□□□ 0.52
CCDC47-202ENST00000403162 DYRK1AQ13627 763 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 SLC22A10Q63ZE4 541 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 VN1R4Q7Z5H5 301 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 BMP8AQ7Z5Y6 402 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 OR4N4Q8N0Y3 316 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 OR4K14Q8NGD5 310 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 KCNN3Q9UGI6 736 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 BAIAP2Q9UQB8 552 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 CAMK2AQ9UQM7 478 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 PLEKHM1Q9Y4G2 1056 aa18.29■□□□□ 0.52
CCDC47-202ENST00000403162 MEN1O00255 615 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 ZNF3P17036 446 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 CAMK2DQ13557 499 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 ST3GAL2Q16842 350 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 WDR45BQ5MNZ6 344 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 EXOSC6Q5RKV6 272 aaKnown RBP18.28■□□□□ 0.52
CCDC47-202ENST00000403162 FAAH2Q6GMR7 532 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 PAQR7Q86WK9 346 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 HMGB4Q8WW32 186 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 GIMAP1Q8WWP7 306 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 NECAB3Q96P71 396 aaPredicted RBP18.28■□□□□ 0.52
CCDC47-202ENST00000403162 EMC3Q9P0I2 261 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 KCMF1Q9P0J7 381 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 SCML1Q9UN30 329 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 MED31Q9Y3C7 131 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 CHURC1-FNTBB4DL54 471 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 PTP4A3O75365 173 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 STX11O75558 287 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 CLUP10909 449 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 SNRPBP14678 240 aaKnown RBP18.28■□□□□ 0.52
CCDC47-202ENST00000403162 PYCR1P32322 319 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 CCR6P51684 374 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 KLF9Q13886 244 aaPredicted RBP18.28■□□□□ 0.52
CCDC47-202ENST00000403162 CRMP1Q14194 572 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 AMZ1Q400G9 498 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 GPR139Q6DWJ6 353 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 LSRQ86X29 649 aaPredicted RBP18.28■□□□□ 0.52
CCDC47-202ENST00000403162 OR13C5Q8NGS8 318 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 OR51Q1Q8NH59 317 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 OR4C6Q8NH72 309 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 OR56B4Q8NH76 319 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 NT5CQ8TCD5 201 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 RADILQ96JH8 1075 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 ZFP3Q96NJ6 502 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 DLL4Q9NR61 685 aa18.28■□□□□ 0.52
CCDC47-202ENST00000403162 OGG1O15527 345 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 FLRT2O43155 660 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 PDGFAP04085 211 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 CEACAM5P06731 702 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 GABRG2P18507 467 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 RPS15AP62244 130 aaKnown RBP18.27■□□□□ 0.52
CCDC47-202ENST00000403162 RIPPLY1Q0D2K3 151 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 FGL2Q14314 439 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 GAS6Q14393 721 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 LGALSLQ3ZCW2 172 aaPredicted RBP18.27■□□□□ 0.52
CCDC47-202ENST00000403162 DCST2Q5T1A1 773 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 SYT13Q7L8C5 426 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 OR4D9Q8NGE8 314 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 OR14C36Q8NHC7 312 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 PEX11GQ96HA9 241 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 NARFLQ9H6Q4 476 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 KIR3DX1Q9H7L2 352 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 C2orf42Q9NWW7 574 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 SCP2D1Q9UJQ7 156 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 NUP50Q9UKX7 468 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 C19orf53Q9UNZ5 99 aaPredicted RBP18.27■□□□□ 0.52
CCDC47-202ENST00000403162 NPTNQ9Y639 398 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 SCN3AQ9NY46 2000 aa18.27■□□□□ 0.52
CCDC47-202ENST00000403162 A0A1W2PRG6 482 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 TRABD2BA6NFA1 517 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 ANKRD61A6NGH8 418 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 ZNF593O00488 134 aaPredicted RBP18.27■□□□□ 0.51
CCDC47-202ENST00000403162 ARL6IP5O75915 188 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 IFNA7P01567 189 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 NT5EP21589 574 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 FHL5Q5TD97 284 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 FCRLBQ6BAA4 426 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 SSX6Q7RTT6 188 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 SMIM4Q8WVI0 70 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 BRD7Q9NPI1 651 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 MEPEQ9NQ76 525 aaPredicted RBP18.27■□□□□ 0.51
CCDC47-202ENST00000403162 PRDM9Q9NQV7 894 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 RABL2AQ9UBK7 228 aaPredicted RBP18.27■□□□□ 0.51
CCDC47-202ENST00000403162 KCNE5Q9UJ90 142 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 SPATA2Q9UM82 520 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 CLEC4AQ9UMR7 237 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 RABL2BQ9UNT1 228 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.51
CCDC47-202ENST00000403162 TRAV27A0A087WT01 109 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms