RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 Q8N402 240 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 BEND7Q8N7W2 519 aaPredicted RBP3.59□□□□□ -1.84
CLHC1-201ENST00000401408 SUMF1Q8NBK3 374 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 CCDC54Q8NEL0 328 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 OR52N2Q8NGI0 321 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 OR4D10Q8NGI6 311 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 MRAPQ8TCY5 172 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PRAP1Q96NZ9 151 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 TGM7Q96PF1 710 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PPP1R2P1Q96PQ5 205 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 TNFRSF13CQ96RJ3 184 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 COPS8Q99627 209 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 HOPXQ9BPY8 73 aaPredicted RBP3.59□□□□□ -1.84
CLHC1-201ENST00000401408 IFT27Q9BW83 186 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 GPR174Q9BXC1 333 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 ACTRT3Q9BYD9 372 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PIGMQ9H3S5 423 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PRDM7Q9NQW5 492 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 ENTPD7Q9NQZ7 604 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PLEKHJ1Q9NW61 149 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 FBLN5Q9UBX5 448 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 NKX1-2Q9UD57 310 aaPredicted RBP3.59□□□□□ -1.84
CLHC1-201ENST00000401408 MLXQ9UH92 298 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 NUP50Q9UKX7 468 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 AGO1Q9UL18 857 aaKnown RBP3.59□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF346Q9UL40 294 aaKnown RBP3.59□□□□□ -1.84
CLHC1-201ENST00000401408 RNF115Q9Y4L5 304 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 ALG6Q9Y672 507 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 TTC3P53804 2025 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF462Q96JM2 2506 aa3.59□□□□□ -1.84
CLHC1-201ENST00000401408 PTPN13Q12923 2485 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 UBR5O95071 2799 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TEX13DA0A0J9YY54 714 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF840PA6NDX5 716 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 NKX6-3A6NJ46 265 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 MS4A18H0YCH9 400 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 M0QZ24 198 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 M0R036 132 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CYP26A1O43174 497 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TNFAIP8O95379 198 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CLDN7O95471 211 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 VNN1O95497 513 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TXNDC12O95881 172 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CBX7O95931 251 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 AMHP03971 560 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SFTPBP07988 381 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CDH1P12830 882 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 HLA-GP17693 338 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SSTR1P30872 391 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SLC6A8P48029 635 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 GLUD2P49448 558 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF134P52741 427 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 NUDT6P53370 316 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ATP1B3P54709 279 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 NXPH1P58417 271 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 PLP1P60201 277 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 EGR3Q06889 387 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 DCAF4L1Q3SXM0 396 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SLC36A2Q495M3 483 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 OR2G6Q5TZ20 316 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TRIQKQ629K1 86 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 LCTLQ6UWM7 567 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 PLXDC2Q6UX71 529 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 QSOX2Q6ZRP7 698 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SLC16A12Q6ZSM3 486 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ASB18Q6ZVZ8 466 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ABHD13Q7L211 337 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 FCRLAQ7L513 359 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 DYMQ7RTS9 669 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TFAP2DQ7Z6R9 452 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 DHDDSQ86SQ9 333 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SATL1Q86VE3 508 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 IGFN1Q86VF2 1251 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CCDC71Q8IV32 467 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 NAXDQ8IW45 347 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 B3GNT7Q8NFL0 401 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 OR11L1Q8NGX0 322 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 OR2L2Q8NH16 312 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 WDR36Q8NI36 951 aaKnown RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 WFIKKN2Q8TEU8 576 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 PPP4R1Q8TF05 950 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 CDS1Q92903 461 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 TAMM41Q96BW9 452 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SH3YL1Q96HL8 342 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 RNF170Q96K19 258 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZFP42Q96MM3 310 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF570Q96NI8 536 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 QKIQ96PU8 341 aaKnown RBP eCLIP3.58□□□□□ -1.842e-12■■■□□ 17.6
CLHC1-201ENST00000401408 CCDC3Q9BQI4 270 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 NMUR2Q9GZQ4 415 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 FAM124BQ9H5Z6 455 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF430Q9H8G1 570 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 PLEKHA1Q9HB21 404 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 SAE1Q9UBE0 346 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-201ENST00000401408 ZNF225Q9UK10 706 aa3.58□□□□□ -1.84
CLHC1-201ENST00000401408 PSG11Q9UQ72 335 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms