RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ICAM5Q9UMF0 924 aa10.64□□□□□ -0.71
SKA3-203ENST00000400018 EFNA2O43921 213 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 CELA3AP09093 270 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 LIPCP11150 499 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 CD96P40200 585 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 ARHGDIAP52565 204 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 MLF1P58340 268 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 RPP38P78345 283 aaKnown RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 EPS8Q12929 822 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 QPRTQ15274 297 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 SF3B4Q15427 424 aaKnown RBP eCLIP10.63□□□□□ -0.71
SKA3-203ENST00000400018 ZNF791Q3KP31 576 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 CYP4Z2PQ8N1L4 340 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 DHRSXQ8N5I4 330 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 CLDN22Q8N7P3 220 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 PIK3C3Q8NEB9 887 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 OR5L2Q8NGL0 311 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 SMAP2Q8WU79 429 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 OTULINQ96BN8 352 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 ARL5BQ96KC2 179 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 ZNF347Q96SE7 839 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 EPYCQ99645 322 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 DCUN1D5Q9BTE7 237 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 HPF1Q9NWY4 346 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 ACAD8Q9UKU7 415 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 PPIEQ9UNP9 301 aaKnown RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 A0A0B4J2E0 115 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 A0A1B0GX12 115 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 OR6C70A6NIJ9 312 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 AK1P00568 194 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 TP53P04637 393 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 SAGP10523 405 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 CHMP24386 653 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 SFTPDP35247 375 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 SSR4P51571 173 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 PNLIPRP2P54317 469 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 FXYD6P3P58550 94 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 EGR4Q05215 589 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 RRM2BQ7LG56 351 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 HIPK1Q86Z02 1210 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 MARVELD2Q8N4S9 558 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 KIAA1143Q96AT1 154 aaPredicted RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 RBM4BQ9BQ04 359 aaKnown RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 RBM4Q9BWF3 364 aaKnown RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 SACM1LQ9NTJ5 587 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 GPR83Q9NYM4 423 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 ZNF346Q9UL40 294 aaKnown RBP10.63□□□□□ -0.71
SKA3-203ENST00000400018 COL6A6A6NMZ7 2263 aa10.63□□□□□ -0.71
SKA3-203ENST00000400018 IGKV1D-42A0A075B6H8 117 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 LOC100130705A0A1B0GUX0 176 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 FAM183AA6NL82 134 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 OR6C76A6NM76 312 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ALG1L2C9J202 215 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 SYT5O00445 386 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 TO15178 435 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 RAB40ALP0C0E4 278 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 IL5RAQ01344 420 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 MVKQ03426 396 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 LTBQ06643 244 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ST3GAL3Q11203 375 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 NPRL3Q12980 569 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 BIKQ13323 160 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ACSM5Q6NUN0 579 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 YRDCQ86U90 279 aaKnown RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 ZNF786Q8N393 782 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PARP8Q8N3A8 854 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 TMEM239Q8WW34 195 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 TMEM27Q9HBJ8 222 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 RPS6KB2Q9UBS0 482 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 REV1Q9UBZ9 1251 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 DOCK7Q96N67 2140 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ZFYVE26Q68DK2 2539 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 CACNA1AO00555 2505 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 A0A1W2PNR3 127 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ANKRD34BA5PLL1 514 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 TRAPPC13A5PLN9 417 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 C21orf140B9A014 251 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 TNFAIP8O95379 198 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PLGP00747 810 aaPredicted RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 OMPP47874 163 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PCYT1AP49585 367 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 GAS1P54826 345 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 NR1H2P55055 460 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 FOXF1Q12946 379 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PTGES3Q15185 160 aaKnown RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 EXT1Q16394 746 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 EIPR1Q53HC9 387 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 FAHD1Q6P587 224 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 BORAQ6PGQ7 559 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 CHERPQ8IWX8 916 aaKnown RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 GALNT16Q8N428 558 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ZNF527Q8NB42 609 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms