RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 MRPL2Q5T653 305 aaKnown RBP12.85□□□□□ -0.35
VAPA-202ENST00000400000 TMPRSS7Q7RTY8 843 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 C3orf30Q96M34 536 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 WASH4PA8MWX3 477 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 CLDN6P56747 220 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 RPE65Q16518 533 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 METTL25Q8N6Q8 603 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 SECTM1Q8WVN6 248 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 TANKQ92844 425 aa12.85□□□□□ -0.35
VAPA-202ENST00000400000 ZNF623O75123 536 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 ATG12O94817 140 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 F11P03951 625 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 DEFA4P12838 97 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 RFC3P40938 356 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 TNK1Q13470 666 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 GPR18Q14330 331 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 CNOT9Q92600 299 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 GFRA2O00451 464 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 TAS2R20P59543 309 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 EDAQ92838 391 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 NT5C3BQ969T7 300 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 MRPL22Q9NWU5 206 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 HS3ST1O14792 307 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 ANXA7P20073 488 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 IL13RA1P78552 427 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 OTPQ5XKR4 325 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 GPR148Q8TDV2 347 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 GSTO2Q9H4Y5 243 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 GDE1Q9NZC3 331 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 MYOM1P52179 1685 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 DPY19L2P1Q6NXN4 242 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 ADIPOR2Q86V24 386 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 CXCL16Q9H2A7 254 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 R3HDMLQ9H3Y0 253 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 AIFM1O95831 613 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 SLC6A8P48029 635 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 TMBIM6P55061 237 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 GNB2P62879 340 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 DPPA4Q7L190 304 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
VAPA-202ENST00000400000 LTBP3Q9NS15 1303 aa12.84□□□□□ -0.35
VAPA-202ENST00000400000 A6NIZ1 184 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 IGHG1P01857 330 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 OR8G3PP0DMU2 310 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 DNAJB1P25685 340 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 RAP1BP61224 184 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 RAP1AP62834 184 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 SELPLGQ14242 412 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 GPR19Q15760 415 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 L3HYPDHQ96EM0 354 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.35
VAPA-202ENST00000400000 MYADMQ96S97 322 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 DCLRE1CQ96SD1 692 aaKnown RBP12.83□□□□□ -0.35
VAPA-202ENST00000400000 LANCL2Q9NS86 450 aa12.83□□□□□ -0.35
VAPA-202ENST00000400000 BOKQ9UMX3 212 aaPredicted RBP12.83□□□□□ -0.35
VAPA-202ENST00000400000 LOC102725191A0A1B0GVB3 256 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 SGCEO43556 437 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 NUDT7P0C024 238 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 NDUFA6P56556 154 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 LCTLQ6UWM7 567 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 FJX1Q86VR8 437 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 PDZD9Q8IXQ8 264 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 MKXQ8IYA7 352 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 OR5L1Q8NGL2 311 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 WNT4P56705 351 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 C19orf47Q8N9M1 422 aaKnown RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 ZNF480Q8WV37 535 aa12.83□□□□□ -0.36
VAPA-202ENST00000400000 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.36
VAPA-202ENST00000400000 MAGIXQ9H6Y5 334 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms