RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TPTEP56180 551 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 OMA1Q96E52 524 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 BABAM2Q9NXR7 383 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 EXTL2Q9UBQ6 330 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 KLF15Q9UIH9 416 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 IGHV1OR21-1A0A087WYE8 117 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 GABARAPO95166 117 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 FASLGP48023 281 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 LSSP48449 732 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 CLRN1P58418 232 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SRSF5Q13243 272 aaKnown RBP12.95□□□□□ -0.34
SCAF4-202ENST00000399804 OR7A5Q15622 319 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 HLA-BQ31612 363 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SLC37A3Q8NCC5 494 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 OR52I1Q8NGK6 324 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 OR5W2Q8NH69 310 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 WACQ9BTA9 647 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 CHRDQ9H2X0 955 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 FBXO34Q9NWN3 711 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SLC6A14Q9UN76 642 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SATB2Q9UPW6 733 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 NLRC5Q86WI3 1866 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 TEX13CA0A0J9YWL9 993 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 A0A1W2PQL4 384 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-202ENST00000399804 FXNQ16595 210 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 NCCRP1Q6ZVX7 275 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SLC35F2Q8IXU6 374 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 JAGN1Q8N5M9 183 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 C4orf36Q96KX1 117 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 PALMDQ9NP74 551 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 GPR179Q6PRD1 2367 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 ALOX12BO75342 701 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 RGS9O75916 674 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 PPICP45877 212 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ALKBH2Q6NS38 261 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 PMM1Q92871 262 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 PLCXD1Q9NUJ7 323 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 MRPL39Q9NYK5 338 aaKnown RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CTDSP2O14595 271 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 YKT6O15498 198 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 P04436 131 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 PSMB10P40306 273 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 BCAP31P51572 246 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 SOWAHCQ53LP3 525 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 SPTA1P02549 2419 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 NSG1A0A0A6YYJ2 146 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CDHR4A6H8M9 788 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 SEC14L5O43304 696 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TNFSF14O43557 240 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 WBP4O75554 376 aaKnown RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 SLC2A10O95528 541 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 RLN1P04808 185 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 GPR3P46089 330 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 DUSP2Q05923 314 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TRAM1Q15629 374 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 C3orf38Q5JPI3 329 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 DCDC5Q6ZRR9 648 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 LSM14AQ8ND56 463 aaKnown RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TBC1D15Q8TC07 691 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF764Q96H86 408 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TMEM265A0A087WTH1 108 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CT62P0C5K7 136 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-202ENST00000399804 OCLNQ16625 522 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF628Q5EBL2 1059 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 PRAMEF20Q5VT98 475 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 TMEM71Q6P5X7 295 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 Q6ZNX1 250 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 IFI44Q8TCB0 444 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 DDIT4LQ96D03 193 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF350Q9GZX5 532 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 LHX9Q9NQ69 397 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 KLK4Q9Y5K2 254 aa12.94□□□□□ -0.34
SCAF4-202ENST00000399804 ARRDC5A6NEK1 342 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 H7C1C5 153 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 IDH3BO43837 385 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 DPM1O60762 260 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 NR2C1P13056 603 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 S1PR1P21453 382 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 HMGA2P52926 109 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 EPHA4P54764 986 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 LCN6P62502 163 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms