RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 IL32P24001 234 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 LOXP28300 417 aaPredicted RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 CRATP43155 626 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 HTR3AP46098 478 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 IDH2P48735 452 aaKnown RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 CLK1P49759 484 aaKnown RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 POLR2JP52435 117 aaKnown RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 NR1H2P55055 460 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 P2RY6Q15077 328 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 WFDC8Q8IUA0 241 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 PEX5LQ8IYB4 626 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 MIER2Q8N344 545 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 LRRC8CQ8TDW0 803 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 CNOT9Q92600 299 aaKnown RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 C7orf26Q96N11 449 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 PIP5K1AQ99755 562 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 TPT1P8Q9HAU6 139 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 CALML5Q9NZT1 146 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 HDGFL3Q9Y3E1 203 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 FAM234BA2RU67 622 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ZNF724A8MTY0 619 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 POLR3GO15318 223 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 SMPD2O60906 423 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ADAM11O75078 769 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 TGDSO95455 350 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 PMS2P2O95744 297 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ADAP00813 363 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 OR3A2P47893 321 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 CRISP3P54108 245 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 DSTNP60981 165 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 STX1BP61266 288 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 PLAURQ03405 335 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ITGADQ13349 1161 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 MRPL2Q5T653 305 aaKnown RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 EPGNQ6UW88 154 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 GALNT5Q7Z7M9 940 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 MTDHQ86UE4 582 aaKnown RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 OR9I1Q8NGQ6 314 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 KISS1RQ969F8 398 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 S100PBPQ96BU1 408 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 PLPPR2Q96GM1 343 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ATP6V1G3Q96LB4 118 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ZNF300Q96RE9 604 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 CCL19Q99731 98 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 THUMPD1Q9NXG2 353 aaKnown RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 EMC3Q9P0I2 261 aa11.9□□□□□ -0.5
VCX3A-202ENST00000398729 ING1Q9UK53 422 aaPredicted RBP11.9□□□□□ -0.5
VCX3A-202ENST00000398729 TMEM247A6NEH6 219 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF814B7Z6K7 855 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 FAAHO00519 579 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 AP3D1O14617 1153 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 DNPH1O43598 174 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 BCHEP06276 602 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ETFAP13804 333 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 CCNA2P20248 432 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 POLR2HP52434 150 aaKnown RBP11.89□□□□□ -0.51
VCX3A-202ENST00000398729 MVDP53602 400 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 PDK3Q15120 406 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 GTDC1Q4AE62 458 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 Q6ZT83 130 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF440Q8IYI8 595 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 OR52P1PQ8NH57 321 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 DYDC1Q8WWB3 177 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 HSD17B8Q92506 261 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 VPS33AQ96AX1 596 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF775Q96BV0 537 aaPredicted RBP11.89□□□□□ -0.51
VCX3A-202ENST00000398729 DDIT4LQ96D03 193 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ARL5BQ96KC2 179 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 OR11A1Q9GZK7 315 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 CACYBPQ9HB71 228 aaKnown RBP11.89□□□□□ -0.51
VCX3A-202ENST00000398729 NGBQ9NPG2 151 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 ROS1P08922 2347 aa11.89□□□□□ -0.51
VCX3A-202ENST00000398729 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 FREM1Q5H8C1 2179 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF208O43345 1280 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 CNOT4O95628 575 aaKnown RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TFPTP0C1Z6 253 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TACR3P29371 465 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 SLC1A3P43003 542 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 MRPL19P49406 292 aaKnown RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 MAP2K6P52564 334 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 OR2B6P58173 313 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms