RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 BCL2L10Q9HD36 194 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PTTG3PQ9NZH4 202 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 POLR1DQ9Y2S0 133 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 UNC13CQ8NB66 2214 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ANKRD31Q8N7Z5 1873 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 H7C1C5 153 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 AKR7A2O43488 359 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HTR2BP41595 481 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 HTR3AP46098 478 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OMPP47874 163 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LCN6P62502 163 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 GPR176Q14439 515 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PON3Q15166 354 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM201Q5SNT2 666 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OLFML2AQ68BL7 652 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LEG1Q6P5S2 330 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PRR22Q8IZ63 422 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OSTF1Q92882 214 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 C4orf36Q96KX1 117 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF717Q9BY31 904 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SFXN1Q9H9B4 322 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TBC1D29Q9UFV1 150 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PCDHGB7Q9Y5F8 929 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CACNG2Q9Y698 323 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 C2orf74A8MZ97 194 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TNFP01375 233 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 DRD5P21918 477 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 STOMP27105 288 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 EMDP50402 254 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CLDN12P56749 244 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TNFRSF17Q02223 184 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 MAB21L1Q13394 359 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BICRALQ6AI39 1079 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 GID4Q8IVV7 300 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ETFBKMTQ8IXQ9 262 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CEP76Q8TAP6 659 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ASB16Q96NS5 453 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 MS4A4EQ96PG1 132 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SEMA6CQ9H3T2 930 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SIRT4Q9Y6E7 314 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 A0A1W2PRQ8 180 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OR2W5A6NFC9 320 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 B4DXG7 233 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FLRT2O43155 660 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LIMS3P0CW19 117 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LIMS4P0CW20 117 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 NTSR1P30989 418 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 KIR2DL3P43628 341 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 NR0B1P51843 470 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SNRPNP63162 240 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 COTL1Q14019 142 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 GXYLT1Q4G148 440 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CLDN22Q8N7P3 220 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 BEST4Q8NFU0 473 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 ABHD4Q8TB40 342 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TSEN15Q8WW01 171 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SLC22A18Q96BI1 424 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 DHRS1Q96LJ7 313 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 RNF32Q9H0A6 362 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SAV1Q9H4B6 383 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TCF7L1Q9HCS4 588 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 LHX9Q9NQ69 397 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 SIDT1Q9NXL6 827 aaKnown RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 FBXL4Q9UKA2 621 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 TRAPPC4Q9Y296 219 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 COA3Q9Y2R0 106 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-202ENST00000398417 MAU2Q9Y6X3 613 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 CUL9Q8IWT3 2517 aa4.58□□□□□ -1.68
SMAD4-202ENST00000398417 POM121BA6NF01 834 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 H0YGG7 62 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 AGR2O95994 175 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 EIF4EP06730 217 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 AHCYP23526 432 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ERP29P30040 261 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SSTR2P30874 369 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 POU4F3Q15319 338 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SF3A2Q15428 464 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 FAM109BQ6ICB4 259 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 LINC00299Q6ZSB3 139 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 GPAT4Q86UL3 456 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 OR5H6Q8NGV6 325 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 VWCEQ96DN2 955 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MYADMQ96S97 322 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 URM1Q9BTM9 101 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TCEAL2Q9H3H9 227 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 UBR3Q6ZT12 1888 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZFHX4Q86UP3 3567 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 A0A1W2PPL8 197 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 E9PI62 339 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 STX11O75558 287 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 EGFP01133 1207 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PEBP1P30086 187 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 GRK6P43250 576 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RPS5P46782 204 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MNX1P50219 401 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms