RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TMED7-TICAM2A0A0A6YYA0 188 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 TMEM247A6NEH6 219 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 A6NNC1 897 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 FKBP2P26885 142 aaKnown RBP14.88□□□□□ -0.03
APTR-201ENST00000398043 TACR3P29371 465 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 HTR3AP46098 478 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 CLK1P49759 484 aaKnown RBP14.88□□□□□ -0.03
APTR-201ENST00000398043 CDK6Q00534 326 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 LARS2Q15031 903 aaKnown RBP14.88□□□□□ -0.03
APTR-201ENST00000398043 RNPS1Q15287 305 aaKnown RBP14.88□□□□□ -0.03
APTR-201ENST00000398043 GTF2IRD2BQ6EKJ0 949 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 REEP3Q6NUK4 255 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 PPP4R4Q6NUP7 873 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 GTF2IRD2Q86UP8 949 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 SLC43A2Q8N370 569 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 SLC35B4Q969S0 331 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 PSD2Q9BQI7 771 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 OR11A1Q9GZK7 315 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 BCO1Q9HAY6 547 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 KLHL14Q9P2G3 628 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 KLHL13Q9P2N7 655 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.88□□□□□ -0.03
APTR-201ENST00000398043 PROCRQ9UNN8 238 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 ZNF232Q9UNY5 417 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 TMED7Q9Y3B3 224 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 TESMINQ9Y4I5 508 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 ROS1P08922 2347 aa14.88□□□□□ -0.03
APTR-201ENST00000398043 ALPK2Q86TB3 2170 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 IGHV3-15A0A0B4J1V0 119 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 TMEM72A0PK05 275 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 EVPLLA8MZ36 301 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 FXYD1O00168 92 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 ANGPT2O15123 496 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 ZNF208O43345 1280 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 CYTIPO60759 359 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 GCM2O75603 506 aaPredicted RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 PRKD3O94806 890 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 PMS2P2O95744 297 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 PLGP00747 810 aaPredicted RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 UGT2B10P36537 528 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 CPOXP36551 454 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 GZMMP51124 257 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 POLR2HP52434 150 aaKnown RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 CTBP2P56545 445 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 SF3A3Q12874 501 aaKnown RBP eCLIP14.87□□□□□ -0.03
APTR-201ENST00000398043 KLF10Q13118 480 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 ZNF311Q5JNZ3 666 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 C22orf34Q6ZV56 151 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 NUFIP2Q7Z417 695 aaKnown RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 NET1Q7Z628 596 aaPredicted RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 SERPINA11Q86U17 422 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 DACH2Q96NX9 599 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 KAT8Q9H7Z6 458 aaKnown RBP14.87□□□□□ -0.03
APTR-201ENST00000398043 RASSF1Q9NS23 344 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 HDGFL3Q9Y3E1 203 aa14.87□□□□□ -0.03
APTR-201ENST00000398043 CADP27708 2225 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 ZC3H12DA2A288 527 aaKnown RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 SH3D21A4FU49 640 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 SULT2B1O00204 365 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 TPST1O60507 370 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 PRKAR1BP31321 381 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 MAP2K6P52564 334 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 PCBP3P57721 371 aaKnown RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 MTPNP58546 118 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 H3F3AP84243 136 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 NFYCQ13952 458 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 SCARB2Q14108 478 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 ABLIM2Q6H8Q1 611 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 DHRS4L2Q6PKH6 230 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 ZNF550Q7Z398 422 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 MTDHQ86UE4 582 aaKnown RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 REXO5Q96IC2 774 aaKnown RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 GPATCH1Q9BRR8 931 aaKnown RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 SLC39A3Q9BRY0 314 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 MRGBPQ9NV56 204 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 TRAPPC4Q9Y296 219 aa14.86□□□□□ -0.03
APTR-201ENST00000398043 SPIN1Q9Y657 262 aaPredicted RBP14.86□□□□□ -0.03
APTR-201ENST00000398043 IGKV3D-15A0A087WSY6 115 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 ZNF814B7Z6K7 855 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 C5orf58C9J3I9 102 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 DNPH1O43598 174 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 FESP07332 822 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 YES1P07947 543 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 IMPDH2P12268 514 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 POU2F1P14859 743 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
APTR-201ENST00000398043 CSNK2A1P68400 391 aaPredicted RBP14.85□□□□□ -0.03
APTR-201ENST00000398043 CAPRIN1Q14444 709 aaKnown RBP14.85□□□□□ -0.03
APTR-201ENST00000398043 PDK3Q15120 406 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 TRMT5Q32P41 509 aaKnown RBP14.85□□□□□ -0.03
APTR-201ENST00000398043 GLIPR1L2Q4G1C9 344 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 COQ5Q5HYK3 327 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 WBP2NLQ6ICG8 309 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 TFAP2EQ6VUC0 442 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 STAC2Q6ZMT1 411 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 WFIKKN1Q96NZ8 548 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 ARMC7Q9H6L4 198 aa14.85□□□□□ -0.03
APTR-201ENST00000398043 PRRC2AP48634 2157 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms