RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ZNF208O43345 1280 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 GCKP35557 465 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SMIM11AP58511 58 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 RAC1P63000 192 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ATP6AP1Q15904 470 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 C3orf33Q6P1S2 294 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 RNF217Q8TC41 542 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 FUZQ9BT04 418 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 AGPAT4Q9NRZ5 378 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ASF1BQ9NVP2 202 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 VNN3Q9NY84 501 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 DNAJB9Q9UBS3 223 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LYVE1Q9Y5Y7 322 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SPIN1Q9Y657 262 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 AP4B1Q9Y6B7 739 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ZNF407Q9C0G0 2248 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SPTA1P02549 2419 aa17.56■□□□□ 0.4
MAP1LC3A-203ENST00000397709 MED12Q93074 2177 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TTLL8A6PVC2 850 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 H3BML4 177 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 AQP7O14520 342 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CLOCKO15516 846 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 DEAF1O75398 565 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 GADD45GO95257 159 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ACTL6AO96019 429 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 BMP7P18075 431 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CCNA2P20248 432 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 FASP25445 335 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 RBM34P42696 430 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LIMS1P48059 325 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LHX2P50458 406 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 HMGA2P52926 109 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 KRTCAP3Q53RY4 240 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 DCST1Q5T197 706 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 VASNQ6EMK4 673 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 OR4C15Q8NGM1 316 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SLC7A13Q8TCU3 470 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SLC25A43Q8WUT9 341 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TMEM255BQ8WV15 326 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LRTOMTQ8WZ04 291 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ABTB1Q969K4 478 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 BBC3Q96PG8 261 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TMEM43Q9BTV4 400 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 EXO5Q9H790 373 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TMEM185BQ9H7F4 350 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 REEP1Q9H902 201 aa17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 RRP15Q9Y3B9 282 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TRBV4-1A0A0J9YWV2 114 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 A8MVM7 634 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 H0YHG0 523 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TNFRSF11BO00300 401 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 NPIPB7O75200 414 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LDLRP01130 860 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 PEPDP12955 493 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 POU3F2P20265 443 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 FKBP2P26885 142 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SHC1P29353 583 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 UGT2B15P54855 530 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 HSF1Q00613 529 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 EGR4Q05215 589 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CRYZQ08257 329 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 GK3PQ14409 553 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SYT14P1Q58G82 188 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 HMBOX1Q6NT76 420 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 LILRA2Q8N149 483 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 GHDCQ8N2G8 530 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 OR52J3Q8NH60 311 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 STK35Q8TDR2 534 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TMEM239Q8WW34 195 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ACOT11Q8WXI4 607 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 HS6ST2Q96MM7 605 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 EPYCQ99645 322 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 OR11A1Q9GZK7 315 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 NTN4Q9HB63 628 aa17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SAMHD1Q9Y3Z3 626 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3A-203ENST00000397709 A0A087WUU8 490 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ZC3H12DA2A288 527 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ZNF708P17019 499 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 STARP49675 285 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CLK1P49759 484 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CLDN18P56856 261 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 FOXD4Q12950 439 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SEC23BQ15437 767 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 BCL2A1Q16548 175 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 EXOC3L2Q2M3D2 409 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 FGD3Q5JSP0 725 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ARHGAP11AQ6P4F7 1023 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 PODNL1Q6PEZ8 512 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 TTC33Q6PID6 262 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 GGNQ86UU5 652 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 CHERPQ8IWX8 916 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ATP6V1C2Q8NEY4 427 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 DDIT4LQ96D03 193 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 ALPK1Q96QP1 1244 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 PKP2Q99959 881 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SLC19A3Q9BZV2 496 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 DNAJC13O75165 2243 aa17.53■□□□□ 0.4
MAP1LC3A-203ENST00000397709 A0A1B0GTH9 108 aa17.52■□□□□ 0.4
MAP1LC3A-203ENST00000397709 SH3PXD2BA1X283 911 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms