RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CLIP4Q8N3C7 705 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 OR13C2Q8NGS9 318 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TFAP2CQ92754 450 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TM9SF2Q99805 663 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 MENTQ9BUN1 341 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CHRNA10Q9GZZ6 450 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CHRNA9Q9UGM1 479 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 WIF1Q9Y5W5 379 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GPR171O14626 319 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 KIAA0513O60268 411 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GFRA3O60609 400 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 INMTO95050 263 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FGF5P12034 268 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 RCVRNP35243 200 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TSTQ16762 297 aaKnown RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 ARTNQ5T4W7 220 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 C1orf140Q5VVS0 124 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 IGFN1Q86VF2 1251 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 MEX3DQ86XN8 651 aaKnown RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM255BQ8WV15 326 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CPNE2Q96FN4 548 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 LHPPQ9H008 270 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CXorf56Q9H5V9 222 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GPR83Q9NYM4 423 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CLCA1A8K7I4 914 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC22A1O15245 554 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 APOL3O95236 402 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 ABCD3P28288 659 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CSF2RBP32927 897 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SDC2P34741 201 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 MNDAP41218 407 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 RIDAP52758 137 aaKnown RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CARD18P57730 90 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 OR12D2P58182 307 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GPR85P60893 370 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 USP43Q70EL4 1123 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PLCZ1Q86YW0 608 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FAM131CQ96AQ9 280 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 ANKRD9Q96BM1 317 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PITX2Q99697 317 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC6A13Q9NSD5 602 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 MED17Q9NVC6 651 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 AHCTF1Q8WYP5 2266 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PLXNA4Q9HCM2 1894 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 OR6C70A6NIJ9 312 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 DLGAP3O95886 979 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 NR4A1P22736 598 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CHMP24386 653 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MAN2A2P49641 1150 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 RNF220Q5VTB9 566 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 LHFPL3Q86UP9 236 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MSRB3Q8IXL7 192 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 LILRA2Q8N149 483 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PNLDC1Q8NA58 520 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SDR9C7Q8NEX9 313 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 NUBPLQ8TB37 319 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 HAVCR2Q8TDQ0 301 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 DDA1Q9BW61 102 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MYOTQ9UBF9 498 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 GPR55Q9Y2T6 319 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 A0A087WZY1 265 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 A0A1W2PQ72 361 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MRPL33O75394 65 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TBXA2RP21731 343 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ACP1P24666 158 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ADAM8P78325 824 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TRAM1Q15629 374 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TBPL2Q6SJ96 375 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 FAM180AQ6UWF9 173 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SATL1Q86VE3 508 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MARCH9Q86YJ5 346 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 RBM45Q8IUH3 476 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SYT14Q8NB59 555 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 NEK7Q8TDX7 302 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 DUS3LQ96G46 650 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 KLHL15Q96M94 604 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 NKIRAS2Q9NYR9 191 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PRKNO60260 465 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CBR3O75828 277 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 HPP00738 406 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 STSP08842 583 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CELP19835 753 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ENPP1P22413 925 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PYCR1P32322 319 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PSMD7P51665 324 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MAP2K6P52564 334 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MXD1Q05195 221 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SELENBP1Q13228 472 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CDK5R2Q13319 367 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SPHARQ15513 63 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 C1orf94Q6P1W5 598 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 LSM14AQ8ND56 463 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 OR5J2Q8NH18 312 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 M1APQ8TC57 530 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SLC7A13Q8TCU3 470 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 OIT3Q8WWZ8 545 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM203Q969S6 136 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TNFRSF13CQ96RJ3 184 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms