RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 UNQ6494/PRO21346Q6UXR6 183 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 LINC00471Q8N535 108 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 ST8SIA1Q92185 356 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 NTNG2Q96CW9 530 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 FAM173AQ9BQD7 235 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 PSD2Q9BQI7 771 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 ZNF426Q9BUY5 554 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 TMED7Q9Y3B3 224 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 AP4B1Q9Y6B7 739 aa19.21■□□□□ 0.67
CPNE1-204ENST00000397443 IGKV1D-42A0A075B6H8 117 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 ENO4A6NNW6 628 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 LRRN3E7EW58 273 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 ADAP00813 363 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 IGFBP1P08833 259 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-204ENST00000397443 MAKP20794 623 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 GSSP48637 474 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 ZNF766Q5HY98 468 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 NHSL2Q5HYW2 709 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 C1orf94Q6P1W5 598 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 ADGRG3Q86Y34 549 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 BPIFA2Q96DR5 249 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 MBOAT4Q96T53 435 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 UCK2Q9BZX2 261 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 RNF32Q9H0A6 362 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 POFUT2Q9Y2G5 429 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 NCKAP5O14513 1909 aa19.2■□□□□ 0.66
CPNE1-204ENST00000397443 TAF4O00268 1085 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 SUSD5O60279 629 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 NME2P1O60361 137 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 CBR3O75828 277 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 CLIC3O95833 236 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 OPN1LWP04000 364 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 HK1P19367 917 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 IL11P20809 199 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 NME2P22392 152 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 POU1F1P28069 291 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 EPHA2P29317 976 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 RBM34P42696 430 aaKnown RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TNFSF10P50591 281 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TAF11Q15544 211 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 GNPDA2Q8TDQ7 276 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 ADI1Q9BV57 179 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 OR11A1Q9GZK7 315 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TMEM185BQ9H7F4 350 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 HHATLQ9HCP6 504 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 KRCC1Q9NPI7 259 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 BOKQ9UMX3 212 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TMEM72A0PK05 275 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 ZC3H12DA2A288 527 aaKnown RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 H0YJX3 145 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 CDC42EP2O14613 210 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TRAPPC6AO75865 159 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 SAGP10523 405 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 PEPDP12955 493 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 TMPRSS3P57727 454 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 CXADRP78310 365 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 FOXO1Q12778 655 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 Q6ZPB1 254 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 CDK20Q8IZL9 346 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 RNF113BQ8IZP6 322 aaKnown RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 DHRSXQ8N5I4 330 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 C10orf53Q8N6V4 93 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 POC1BQ8TC44 478 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 EXTL1Q92935 676 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 UBL7Q96S82 380 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 DGCR6LQ9BY27 220 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 ZFP64Q9NPA5 681 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 KLF13Q9Y2Y9 288 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-204ENST00000397443 BOD1L1Q8NFC6 3051 aa19.19■□□□□ 0.66
CPNE1-204ENST00000397443 FAM166BA8MTA8 275 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 H3BN98 237 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 GDF1P27539 372 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 HTR3AP46098 478 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 HSPA13P48723 471 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 MEOX1P50221 254 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 DSCR4P56555 118 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 EGR4Q05215 589 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 PRKCDQ05655 676 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 C1QL3Q5VWW1 255 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 RAET1LQ5VY80 246 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 BORAQ6PGQ7 559 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 YRDCQ86U90 279 aaKnown RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 ZCCHC14Q8WYQ9 949 aaKnown RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 KTI12Q96EK9 354 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 SMAD5Q99717 465 aaKnown RBP19.18■□□□□ 0.66
CPNE1-204ENST00000397443 C15orf41Q9Y2V0 281 aa19.18■□□□□ 0.66
CPNE1-204ENST00000397443 H3BML4 177 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 CH25HO95992 272 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 CDH2P19022 906 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-204ENST00000397443 RPS5P46782 204 aaKnown RBP19.17■□□□□ 0.66
CPNE1-204ENST00000397443 PLGLB1Q02325 96 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 RFX4Q33E94 735 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 SLC36A3Q495N2 470 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 IGFL2Q6UWQ7 119 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 MRGPRX4Q96LA9 322 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 CHRNA9Q9UGM1 479 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 LRRC42Q9Y546 428 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 GNAO1P09471 354 aa19.17■□□□□ 0.66
CPNE1-204ENST00000397443 NPRL3Q12980 569 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms