RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 OR12D2P58182 307 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 SEC61A1P61619 476 aaKnown RBP22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 DECR1Q16698 335 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 APOOLQ6UXV4 268 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 PDZD9Q8IXQ8 264 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 GJD3Q8N144 294 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 OR6V1Q8N148 313 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF671Q8TAW3 534 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 GANCQ8TET4 914 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF296Q8WUU4 475 aaPredicted RBP22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 OR2M5A3KFT3 312 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 PRNPP04156 253 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ID2Q02363 134 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 MAPK14Q16539 360 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ATOH1Q92858 354 aaPredicted RBP22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ARHGDIGQ99819 225 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 ARL6Q9H0F7 186 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 OR52D1Q9H346 318 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 CAPN10Q9HC96 672 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 CPNE7Q9UBL6 633 aa22.19■■□□□ 1.14
CSNK1E-203ENST00000396832 SIGLEC5O15389 551 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 GABRA1P14867 456 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 CPN1P15169 458 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 ANXA7P20073 488 aaKnown RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 SIGLEC14Q08ET2 396 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 MLF2Q15773 248 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 LILRA6Q6PI73 481 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 CMTM4Q8IZR5 234 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 FANK1Q8TC84 345 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 CXorf40AQ8TE69 158 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 PXYLP1Q8TE99 480 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 MRPS24Q96EL2 167 aaKnown RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF514Q96K75 400 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 LINC00615Q96LM1 132 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 IGLON5A6NGN9 336 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 D6RAR5 112 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 SELENOFO60613 162 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 OR2A4O95047 310 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 CBX7O95931 251 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 HIST1H1TP22492 207 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 VIPR2P41587 438 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 KRT33BQ14525 404 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 WDR88Q6ZMY6 472 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 GRASPQ7Z6J2 395 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 OR52I2Q8NH67 350 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 ELP4Q96EB1 424 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 OR2A7Q96R45 310 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 WSB2Q9NYS7 404 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 GPR34Q9UPC5 381 aa22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 AK6Q9Y3D8 172 aaKnown RBP22.18■■□□□ 1.14
CSNK1E-203ENST00000396832 OTOL1A6NHN0 477 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 FLRT2O43155 660 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 STX11O75558 287 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SNAPC5O75971 98 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ASGR2P07307 311 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ADH1AP07327 375 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 TEX19Q8NA77 164 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 OR51L1Q8NGJ5 315 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 LGALS14Q8TCE9 139 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 NR4A3Q92570 626 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 TRAV27A0A087WT01 109 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF98A6NK75 572 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 CREBL2O60519 120 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SDC3O75056 442 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ITGA10O75578 1167 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 PYCR1P32322 319 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 WASP42768 502 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 VEGFBP49765 207 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 FXYD6P3P58550 94 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 PRR5P85299 388 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 FLI1Q01543 452 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 PRPF38BQ5VTL8 546 aaKnown RBP22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 MBOAT2Q6ZWT7 520 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ADAMTS15Q8TE58 950 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 KISS1RQ969F8 398 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 MS4A6EQ96DS6 147 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SLC35A4Q96G79 324 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SLC38A3Q99624 504 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SLC6A17Q9H1V8 727 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 ANKRD19PQ9H560 264 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 KLHL28Q9NXS3 571 aa22.17■■□□□ 1.14
CSNK1E-203ENST00000396832 SYT5O00445 386 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 HIST1H2ABP04908 130 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ADH5P11766 374 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 PPP3CBP16298 524 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 NRG3P56975 720 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 TAS2R43P59537 309 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 GK2Q14410 553 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 MLC1Q15049 377 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 HIST3H2AQ7L7L0 130 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 OR5J2Q8NH18 312 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 HIST1H2ACQ93077 130 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 INSM2Q96T92 566 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 EVA1AQ9H8M9 152 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 KLK11Q9UBX7 282 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 CACNA1CQ13936 2221 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 KIAA0100Q14667 2235 aaKnown RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 TRAV1-2A0A0B4J238 106 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 FAM74A7A6NL05 159 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms