RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC37A1P57057 533 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 GGTLC2Q14390 218 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 INSL4Q14641 139 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 SMAD2Q15796 467 aaKnown RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 NDUFAF6Q330K2 333 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 MZT2AQ6P582 158 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 DPY19L2P2Q6ZN68 376 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 VASH1Q7L8A9 365 aaPredicted RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 AKAP14Q86UN6 197 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 CELF2-AS1Q8N7Q2 184 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 CYB561A3Q8NBI2 242 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 SENP5Q96HI0 755 aaPredicted RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 ERVMER34-1Q9H9K5 563 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 EXOSC3Q9NQT5 275 aaKnown RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 SACM1LQ9NTJ5 587 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 TP53BP1Q12888 1972 aaPredicted RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 HEATR5AQ86XA9 2040 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 IGKV3D-11A0A0A0MRZ8 115 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 C2orf92A0A1B0GVN3 265 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 RHPN2P1A8MT19 583 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 ARPC3O15145 178 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 TMCC2O75069 709 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 OR7A10O76100 309 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 IL33O95760 270 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 SLC16A1P53985 500 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 RPS4XP62701 263 aaKnown RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 CSTF1Q05048 431 aaKnown RBP15.4■□□□□ 0.06
NUP50-202ENST00000396096 RIN1Q13671 783 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 UBXN2BQ14CS0 331 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 NRARPQ7Z6K4 114 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 POMGNT2Q8NAT1 580 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 OR52E2Q8NGJ4 325 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 ACOT12Q8WYK0 555 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 SLC46A1Q96NT5 459 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 PPP1R3EQ9H7J1 279 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 UBQLN4Q9NRR5 601 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 FBXL4Q9UKA2 621 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 ZNF337Q9Y3M9 751 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 RNF215Q9Y6U7 377 aa15.4■□□□□ 0.06
NUP50-202ENST00000396096 TMEM265A0A087WTH1 108 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 SYNDIG1LA6NDD5 238 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 MCIDASD6RGH6 385 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 PIAS2O75928 621 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 HLA-DQB1P01920 261 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 MRPL3P09001 348 aaKnown RBP15.39■□□□□ 0.05
NUP50-202ENST00000396096 HIST1H1CP16403 213 aaKnown RBP15.39■□□□□ 0.05
NUP50-202ENST00000396096 CASP3P42574 277 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 EVX1P49640 407 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 TPTEP56180 551 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 STARD6P59095 220 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 RPL6Q02878 288 aaKnown RBP15.39■□□□□ 0.05
NUP50-202ENST00000396096 AGAP6Q5VW22 663 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 NKAIN2Q5VXU1 208 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 FAAH2Q6GMR7 532 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 WBP2NLQ6ICG8 309 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 SPATC1Q76KD6 591 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 ZNF527Q8NB42 609 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 C7orf57Q8NEG2 295 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 LIPHQ8WWY8 451 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 ART5Q96L15 291 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 AGAP4Q96P64 663 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 GPX7Q96SL4 187 aaPredicted RBP15.39■□□□□ 0.05
NUP50-202ENST00000396096 DDOQ99489 341 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 COMMD3Q9UBI1 195 aa15.39■□□□□ 0.05
NUP50-202ENST00000396096 IGKV1D-42A0A075B6H8 117 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 TMEM150CB9EJG8 249 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 E9PI62 339 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 IDH3BO43837 385 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 SC5DO75845 299 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 OR2B3O76000 313 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 PPM1FP49593 454 aaPredicted RBP15.38■□□□□ 0.05
NUP50-202ENST00000396096 SKP2Q13309 424 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 LCN1P1Q5VSP4 162 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 DMKNQ6E0U4 476 aaPredicted RBP15.38■□□□□ 0.05
NUP50-202ENST00000396096 CNIH2Q6PI25 160 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 FAM98AQ8NCA5 519 aaKnown RBP15.38■□□□□ 0.05
NUP50-202ENST00000396096 C4orf36Q96KX1 117 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 HSPA12BQ96MM6 686 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 NRIP3Q9NQ35 241 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 UCKL1Q9NWZ5 548 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 SEMA5BQ9P283 1151 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 IER3IP1Q9Y5U9 82 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 GON4LQ3T8J9 2241 aa15.38■□□□□ 0.05
NUP50-202ENST00000396096 FRG2CA6NGY1 282 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 GNB5O14775 395 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 DYRK3O43781 588 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 HPGDSO60760 199 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SLC19A2O60779 497 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 NCR1O76036 304 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 IGKV3-11P04433 115 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 PNMTP11086 282 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 LCN1P31025 176 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 RORAP35398 523 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 HSD11B2P80365 405 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 KCNAB1Q14722 419 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 PYDC2Q56P42 97 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 PXKQ7Z7A4 578 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 ATG4DQ86TL0 474 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms