RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 F2RL3Q96RI0 385 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 RLIMQ9NVW2 624 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 RDH8Q9NYR8 311 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 COPS3Q9UNS2 423 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 IRGMA1A4Y4 181 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 H7BY64 318 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 GTPBP1O00178 669 aaKnown RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 FFAR1O14842 300 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 OR1F1O43749 312 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 LDOC1O95751 146 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 GPR75O95800 540 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ANXA3P12429 323 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CPEP16870 476 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 MAOBP27338 520 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CD38P28907 300 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SDC2P34741 201 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 NUP62P37198 522 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 BUD31P41223 144 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 EVX1P49640 407 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PSMD4P55036 377 aaKnown RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 RPL6Q02878 288 aaKnown RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 MXD1Q05195 221 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CAMK2DQ13557 499 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ZNF169Q14929 603 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 NCF4Q15080 339 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 C14orf28Q4W4Y0 310 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 EIPR1Q53HC9 387 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CYB5R2Q6BCY4 276 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 RPL13AP3Q6NVV1 102 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ENPP7Q6UWV6 458 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 LRRC17Q8N6Y2 441 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 HORMAD2Q8N7B1 307 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ZNF441Q8N8Z8 693 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 OR10G2Q8NGC3 310 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 OR2T4Q8NH00 348 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CEP76Q8TAP6 659 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 AP3S1Q92572 193 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 DIO2Q92813 273 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ATOH1Q92858 354 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 CCDC74AQ96AQ1 378 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PRAP1Q96NZ9 151 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 IL17FQ96PD4 163 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 KATNB1Q9BVA0 655 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 MND1Q9BWT6 205 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 EBPLQ9BY08 206 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SLC19A3Q9BZV2 496 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ACTR6Q9GZN1 396 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SLC38A1Q9H2H9 487 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 MTHFD2LQ9H903 347 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 PCDHB16Q9NRJ7 776 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SDHAF2Q9NX18 166 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 TEX10Q9NXF1 929 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 RAB23Q9ULC3 237 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PLCL2Q9UPR0 1127 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CHST2Q9Y4C5 530 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 MAB21L2Q9Y586 359 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 THADAQ6YHU6 1953 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ANTXRLA6NF34 631 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 J3QRE1 110 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 M0R129 80 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 LGALS8O00214 317 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 TNFRSF11BO00300 401 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SCAMP1O15126 338 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 B3GALT2O43825 422 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CTNSO60931 367 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SEMA7AO75326 666 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 C1QCP02747 245 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PF4P02776 101 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CPMP14384 443 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 STOMP27105 288 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 BTCP35070 178 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 LSSP48449 732 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CDC42P60953 191 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 RAB14P61106 215 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 HNRNPKP61978 463 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS41-203ENST00000395969 TRA2AQ13595 282 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS41-203ENST00000395969 SERTAD2Q14140 314 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 MINDY4Q4G0A6 757 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 C3orf38Q5JPI3 329 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 FRMPD2BQ6IN97 320 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 RGS7BPQ6MZT1 257 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 TCTN3Q6NUS6 607 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CNIH2Q6PI25 160 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 RRM2BQ7LG56 351 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CDRT4Q8N9R6 151 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 UXS1Q8NBZ7 420 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 NAXEQ8NCW5 288 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 PROKR2Q8NFJ6 384 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 FANK1Q8TC84 345 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SLC37A2Q8TED4 501 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 NXPE2Q96DL1 559 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SGCZQ96LD1 299 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 NPAS1Q99742 590 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 SEMA4CQ9C0C4 833 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 MED28Q9H204 178 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 KLHL31Q9H511 634 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 CLN6Q9NWW5 311 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 IMPAD1Q9NX62 359 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms