RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ITGADQ13349 1161 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 GPAT3Q53EU6 434 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 ZNF621Q6ZSS3 439 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 BIVMQ86UB2 503 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 PIWIL2Q8TC59 973 aaKnown RBP14.3□□□□□ -0.12
CXCL12-206ENST00000395795 SLC25A43Q8WUT9 341 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-206ENST00000395795 NEUROG1Q92886 237 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 VPS33AQ96AX1 596 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 DNAJA3Q96EY1 480 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 PERPQ96FX8 193 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 TACO1Q9BSH4 297 aaKnown RBP14.3□□□□□ -0.12
CXCL12-206ENST00000395795 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-206ENST00000395795 NPAP1Q9NZP6 1156 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 OSGIN1Q9UJX0 560 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 LIPT1Q9Y234 373 aa14.3□□□□□ -0.12
CXCL12-206ENST00000395795 CSPG4Q6UVK1 2322 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 TMEM72A0PK05 275 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ZC3H12DA2A288 527 aaKnown RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 TRIM64BA6NI03 449 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 OVOL3O00110 214 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 SULT2B1O00204 365 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 KLF11O14901 512 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 PMS2P2O95744 297 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 DANCRP0C864 163 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ZCCHC18P0CG32 403 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ACAA2P42765 397 aaKnown RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 SLC16A1P53985 500 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 FOXG1P55316 489 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 EPS8Q12929 822 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 MRPL2Q5T653 305 aaKnown RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 Q71RC1 249 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 BHLHA15Q7RTS1 189 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 YTHDF3Q7Z739 585 aaKnown RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 CCDC103Q8IW40 242 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 CMIPQ8IY22 773 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 GLB1L3Q8NCI6 653 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 AKAP1Q92667 903 aaKnown RBP eCLIP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ARL8AQ96BM9 186 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 AURKBQ96GD4 344 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 Q96MF0 132 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ADAM19Q9H013 955 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 MTHFD2LQ9H903 347 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-206ENST00000395795 SERINC1Q9NRX5 453 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 RLIMQ9NVW2 624 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 ZIM2Q9NZV7 527 aa14.29□□□□□ -0.12
CXCL12-206ENST00000395795 H7C1Q1 480 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 PDLIM1O00151 329 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 SLC22A3O75751 556 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 LYZL6O75951 148 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 IL6P05231 212 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 SOD3P08294 240 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 TFPTP0C1Z6 253 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 ETFAP13804 333 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 IDO1P14902 403 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 TXNL4AP83876 142 aaKnown RBP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 DNAJC14Q6Y2X3 702 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 VRK2Q86Y07 508 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 P3H2Q8IVL5 708 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 ARFGAP2Q8N6H7 521 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 ZNF433Q8N7K0 673 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 HSD17B8Q92506 261 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 KISS1RQ969F8 398 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 POTEKPQ9BYX7 375 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 FANCFQ9NPI8 374 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 SLC52A3Q9NQ40 469 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 HDGFL3Q9Y3E1 203 aa14.28□□□□□ -0.12
CXCL12-206ENST00000395795 NIPBLQ6KC79 2804 aaeCLIP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 NSD1Q96L73 2696 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-206ENST00000395795 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 TMED7-TICAM2A0A0A6YYA0 188 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 CDHR4A6H8M9 788 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 SLCO1B7G3V0H7 640 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 RFXANKO14593 260 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 ARHGEF9O43307 516 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 DNPH1O43598 174 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 CNOT4O95628 575 aaKnown RBP14.27□□□□□ -0.13
CXCL12-206ENST00000395795 LY6G6DO95868 133 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 IL32P24001 234 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 TACR3P29371 465 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.13
CXCL12-206ENST00000395795 CLK1P49759 484 aaKnown RBP14.27□□□□□ -0.13
CXCL12-206ENST00000395795 CSNK2A1P68400 391 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-206ENST00000395795 LTBQ06643 244 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 LRRC74AQ0VAA2 488 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 PGGHGQ32M88 737 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 ATG16L1Q676U5 607 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 EPGNQ6UW88 154 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 GALNT5Q7Z7M9 940 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 FUNDC1Q8IVP5 155 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 MSRB3Q8IXL7 192 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 TRIML2Q8N7C3 387 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 ZNF563Q8TA94 476 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 SLC38A5Q8WUX1 472 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 WDR60Q8WVS4 1066 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 GTF2H4Q92759 462 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 PMM1Q92871 262 aa14.27□□□□□ -0.13
CXCL12-206ENST00000395795 TRIM2Q9C040 744 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms