RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 KLHL1Q9NR64 748 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 PCDHGB6Q9Y5F9 930 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 DAPL1A0PJW8 107 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 SERINC4A6NH21 518 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 H3BUI4 141 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 CASKO14936 926 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 HSD17B7P56937 341 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 CDONQ4KMG0 1287 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 RPTNQ6XPR3 784 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 OR5M3Q8NGP4 307 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 BRIX1Q8TDN6 353 aaKnown RBP16.44■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF486Q96H40 463 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-204ENST00000395756 KCTD7Q96MP8 289 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 G6PC3Q9BUM1 346 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 CCDC86Q9H6F5 360 aaKnown RBP16.44■□□□□ 0.22
SREBF1-204ENST00000395756 MALT1Q9UDY8 824 aa16.44■□□□□ 0.22
SREBF1-204ENST00000395756 ASCC3Q8N3C0 2202 aaKnown RBP16.44■□□□□ 0.22
SREBF1-204ENST00000395756 TMEM129A0AVI4 362 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 BLOC1S5-TXNDC5H3BN57 136 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 GTPBP1O00178 669 aaKnown RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 CSF2RBP32927 897 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 DHPSP49366 369 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 AFF3P51826 1226 aaKnown RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 HSD11B2P80365 405 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 NIPAL3Q6P499 406 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 APOOLQ6UXV4 268 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 MEPCEQ7L2J0 689 aaKnown RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 UBE2J2Q8N2K1 259 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 ZMYND19Q96E35 227 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SHDQ96IW2 340 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 TEAD3Q99594 435 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SLC30A2Q9BRI3 323 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 TRIM2Q9C040 744 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 ABCB9Q9NP78 766 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 COMMD3Q9UBI1 195 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 MKL2Q9ULH7 1088 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 IER3IP1Q9Y5U9 82 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 RIIAD1A6NNX1 92 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 C4orf47A7E2U8 309 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 TGM1P22735 817 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 EFNA3P52797 238 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 PLK5Q496M5 336 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 GARNL3Q5VVW2 1013 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 TMPRSS11FQ6ZWK6 438 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 DEPDC7Q96QD5 511 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 ALG8Q9BVK2 526 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 NXF2Q9GZY0 626 aaKnown RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SSX4O60224 188 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 HCN1O60741 890 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 B3GALNT1O75752 331 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SPNP16150 400 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 FUT7Q11130 342 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 FGFBP1Q14512 234 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 TAB1Q15750 504 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 ULK3Q6PHR2 472 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 LNX2Q8N448 690 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 ATP6V1C2Q8NEY4 427 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 THAP3Q8WTV1 239 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 NDC1Q9BTX1 674 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 MUTYHQ9UIF7 546 aa16.43■□□□□ 0.22
SREBF1-204ENST00000395756 SIRT4Q9Y6E7 314 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-204ENST00000395756 HEATR5AQ86XA9 2040 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 J3QLW9 94 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 SOX30O94993 753 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF19P17023 458 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 NAA10P41227 235 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ARL9Q6T311 187 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 C16orf47Q6ZP98 133 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 MARCH9Q86YJ5 346 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ACBD7Q8N6N7 88 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 FAM174AQ8TBP5 190 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF524Q96C55 264 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 CDX2Q99626 313 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 MCCC2Q9HCC0 563 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 LANCL2Q9NS86 450 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 MRPS18AQ9NVS2 196 aaKnown RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 A0A1W2PPK0 400 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 A0A1W2PQL4 384 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 MCIDASD6RGH6 385 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 E9PI62 339 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 HIST1H1CP16403 213 aaKnown RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 STARD6P59095 220 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 SLC3A1Q07837 685 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ARHGAP40Q5TG30 622 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 ZNF322Q6U7Q0 402 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-204ENST00000395756 TMPRSS11AQ6ZMR5 421 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 RTL4Q6ZR62 310 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 LINC00299Q6ZSB3 139 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 SPATC1Q76KD6 591 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 C14orf105Q9NVL8 296 aa16.42■□□□□ 0.22
SREBF1-204ENST00000395756 IRGMA1A4Y4 181 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 PSMD9O00233 223 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 FMO6PO60774 539 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 NUDT14O95848 222 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 FOSL2P15408 326 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 ITPKBP27987 946 aa16.41■□□□□ 0.22
SREBF1-204ENST00000395756 ACVR1BP36896 505 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms