RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SPIN1Q9Y657 262 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMA-202ENST00000395303 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 TMED7-TICAM2A0A0A6YYA0 188 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 FAM221AA4D161 298 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 FXYD1O00168 92 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 DNPH1O43598 174 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 PMS2P2O95744 297 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 GKN3PP0CG01 181 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 UQCRBP14927 111 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 SLC6A2P23975 617 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 SLC7A1P30825 629 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 PRKAR1BP31321 381 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 GZMMP51124 257 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 TESK1Q15569 626 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZNF311Q5JNZ3 666 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZNF474Q6S9Z5 364 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 FCRLAQ7L513 359 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 LUZP2Q86TE4 346 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 CNEP1R1Q8N9A8 125 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 ARL5BQ96KC2 179 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 SPATA5L1Q9BVQ7 753 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 CACYBPQ9HB71 228 aaKnown RBP11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 TRAPPC4Q9Y296 219 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 TMED7Q9Y3B3 224 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 EMC9Q9Y3B6 208 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 CAPN7Q9Y6W3 813 aa11.92□□□□□ -0.5
HLA-DMA-202ENST00000395303 SMAD9O15198 467 aaKnown RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 CYTIPO60759 359 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 PRG2P13727 222 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ENPP1P22413 925 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 TACR3P29371 465 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 AGTR1P30556 359 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 KIR2DL3P43628 341 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 DIO1P49895 249 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 MTPNP58546 118 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 SIRPAP78324 504 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 TLE4Q04727 773 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 SF3A3Q12874 501 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 CYLC2Q14093 348 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 DAZAP2Q15038 168 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 REP15Q6BDI9 236 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 NANOGP8Q6NSW7 305 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 SERPINA11Q86U17 422 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 KRT73Q86Y46 540 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZZZ3Q8IYH5 903 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 OR8J3Q8NGG0 315 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 LRRC58Q96CX6 371 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 OR5B2Q96R09 309 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZNF607Q96SK3 696 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZNF559Q9BR84 538 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 TACO1Q9BSH4 297 aaKnown RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 OPN3Q9H1Y3 402 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 EVA1AQ9H8M9 152 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 NANOGQ9H9S0 305 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 BCO1Q9HAY6 547 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ING1Q9UK53 422 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 PROCRQ9UNN8 238 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ANGPT4Q9Y264 503 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 MED13LQ71F56 2210 aa11.91□□□□□ -0.5
HLA-DMA-202ENST00000395303 ZFHX3Q15911 3703 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 TMEM72A0PK05 275 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 PRORSD1PA6NEY8 169 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 SULT2B1O00204 365 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 DYNC1I1O14576 645 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 MRASO14807 208 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 TPST1O60507 370 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 GCM2O75603 506 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 PRKD3O94806 890 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 MFN2O95140 757 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 GOSR1O95249 250 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 EPXP11678 715 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 CD79BP40259 229 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 CPA2P48052 419 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 CTBP2P56545 445 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 H3F3AP84243 136 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 MYBPHQ13203 477 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 PDK3Q15120 406 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 PPP4R4Q6NUP7 873 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 MTDHQ86UE4 582 aaKnown RBP11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 COMTD1Q86VU5 262 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 CALHM3Q86XJ0 350 aa11.9□□□□□ -0.5
HLA-DMA-202ENST00000395303 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms