RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TP53I3Q53FA7 332 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 FIGNL1Q6PIW4 674 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ZNF687Q8N1G0 1237 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 LINC00862A6NCI5 91 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC35G6P0C7Q6 338 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 EPXP11678 715 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 C5AR1P21730 350 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ACTC1P68032 377 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ACTA1P68133 377 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 SGCGQ13326 291 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ARL14Q8N4G2 192 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 COX18Q8N8Q8 333 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC2A12Q8TD20 617 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 GRHL3Q8TE85 626 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 TM4SF19Q96DZ7 209 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ORAI3Q9BRQ5 295 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 GSDMCQ9BYG8 508 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC6A17Q9H1V8 727 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ZCCHC4Q9H5U6 513 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 FGF22Q9HCT0 170 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 PTTG3PQ9NZH4 202 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 MAT2BQ9NZL9 334 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ABRACLQ9P1F3 81 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 COPZ2Q9P299 210 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 TBC1D29Q9UFV1 150 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 SATB2Q9UPW6 733 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 COLEC10Q9Y6Z7 277 aa16.91■□□□□ 0.3
PCDHA1-202ENST00000394633 ZNF860A6NHJ4 632 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SHISA7A6NL88 538 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 LRRN3E7EW58 273 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 OGG1O15527 345 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 MT-ND4P03905 459 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 H2AFB2P0C5Z0 115 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 NT5EP21589 574 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 PITPNAQ00169 270 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SUZ12Q15022 739 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TMEM196Q5HYL7 178 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TOR2AQ5JU69 321 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 PRSS45Q7RTY3 260 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 LUZP2Q86TE4 346 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 C7orf57Q8NEG2 295 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 BEST4Q8NFU0 473 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TNFRSF13CQ96RJ3 184 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 APOOQ9BUR5 198 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 LRRN3Q9H3W5 708 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 BRD7Q9NPI1 651 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 HEBP2Q9Y5Z4 205 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC22A7Q9Y694 548 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 A0A1W2PQU0 124 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 LRRC72A6NJI9 287 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 B3GALT2O43825 422 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 LDB3O75112 727 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 ADH1BP00325 375 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TFP02787 698 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 WNT1P04628 370 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SULT1A3P0DMM9 295 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SULT1A4P0DMN0 295 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TLX1P31314 330 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 AP2S1P53680 142 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 SRP54P61011 504 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 RPS21P63220 83 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 MTFR2Q6P444 385 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 BTN2A1Q7KYR7 527 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 ZAR1Q86SH2 424 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 GIMAP1Q8WWP7 306 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 THAP4Q8WY91 577 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 HGDQ93099 445 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 GUCD1Q96NT3 240 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 OR2A5Q96R48 311 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 DUSP22Q9NRW4 184 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 RNF215Q9Y6U7 377 aa16.9■□□□□ 0.3
PCDHA1-202ENST00000394633 MEIKINA0A087WXM9 373 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 GXYLT2A0PJZ3 443 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF593O00488 134 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 GPR171O14626 319 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 SHOXO15266 292 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CTSVO60911 334 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 GDI2P50395 445 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 FHL1Q13642 323 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 KLF9Q13886 244 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 ZNF613Q6PF04 617 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 OR8H3Q8N146 312 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 FLVCR1-AS1Q8TAF5 88 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 ZMYND19Q96E35 227 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 PELI1Q96FA3 418 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 SORCS2Q96PQ0 1159 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 PHF7Q9BWX1 381 aaPredicted RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 SLC17A9Q9BYT1 436 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 TMEM168Q9H0V1 697 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 MCCC2Q9HCC0 563 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 FLRT3Q9NZU0 649 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 EIF3KQ9UBQ5 218 aaKnown RBP16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 BAIAP2Q9UQB8 552 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 CAMK2AQ9UQM7 478 aa16.89■□□□□ 0.29
PCDHA1-202ENST00000394633 AUP1Q9Y679 476 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms