RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GATCO43716 136 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 NCR1O76036 304 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 OR6A2O95222 327 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 H1F0P07305 194 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 ZNF888P0CJ79 500 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 UGT2B7P16662 529 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 IL1RNP18510 177 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 HIST1H1TP22492 207 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 BMP8BP34820 402 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 CSNK1EP49674 416 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 VEGFCP49767 419 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 RAB5CP51148 216 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 CSNK1G2P78368 415 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 RGNQ15493 299 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SERPINA11Q86U17 422 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 NAA40Q86UY6 237 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 UBALD2Q8IYN6 164 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 NAGSQ8N159 534 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 OR8J2Q8NGG1 315 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ZNF563Q8TA94 476 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 BBS10Q8TAM1 723 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 PIGXQ8TBF5 258 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 NSMAFQ92636 917 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC25A46Q96AG3 418 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 GAL3ST4Q96RP7 486 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MACROD1Q9BQ69 325 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC6A16Q9GZN6 736 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC38A1Q9H2H9 487 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 OR2S2Q9NQN1 319 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ACSL6Q9UKU0 697 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC6A5Q9Y345 797 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ARID1AO14497 2285 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 F5H5P2 479 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SC5DO75845 299 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SOX30O94993 753 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 IFNA17P01571 189 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MBP02144 154 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SYPP08247 313 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 G0S2P27469 103 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 KIR2DL1P43626 348 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 CCR6P51684 374 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 DLX5P56178 289 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 EIF5AP63241 154 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 SIM1P81133 766 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 ALG11Q2TAA5 492 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 C9orf152Q5JTZ5 239 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TCEAL6Q6IPX3 200 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC30A6Q6NXT4 461 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 C3orf33Q6P1S2 294 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TRILQ7L0X0 811 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SHFQ7M4L6 423 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 RASGRP3Q8IV61 690 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MCATQ8IVS2 390 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 CMIPQ8IY22 773 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 KCT2Q8NC54 265 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TRMT10AQ8TBZ6 339 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 POM121Q96HA1 1249 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 EPYCQ99645 322 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MS4A8Q9BY19 250 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 FOXQ1Q9C009 403 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 OR51I1Q9H343 314 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 Q9N2J8 555 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 C5AR2Q9P296 337 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 FBXL3Q9UKT7 428 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ELF5Q9UKW6 265 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 WDR45Q9Y484 360 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 A0A1B0GTL3 188 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 A0A1W2PPC4 97 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TCRBV16S1A1N1A0A5B0 115 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SLC9B1P1A6NJY1 282 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 AIPO00170 330 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 GOSR2O14653 212 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SLC25A12O75746 678 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 GABRB1P18505 474 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 COL9A1P20849 921 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 ATP5A1P25705 553 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 KCNJ5P48544 419 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 MTAPQ13126 283 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 VEZF1Q14119 521 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 GPR18Q14330 331 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 EIF2S3LQ2VIR3 472 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 COL13A1Q5TAT6 717 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 C18orf63Q68DL7 685 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TMEM107Q6UX40 140 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 IL20RBQ6UXL0 311 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 B3GLCTQ6Y288 498 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 RABEPKQ7Z6M1 372 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 LRRC28Q86X40 367 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 KLBQ86Z14 1044 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 OR4N5Q8IXE1 308 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SPEM1Q8N4L4 309 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 LINC00471Q8N535 108 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 POGLUT1Q8NBL1 392 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 ADAMTS18Q8TE60 1221 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CREB3L4Q8TEY5 395 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SFT2D1Q8WV19 159 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FCAMRQ8WWV6 532 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PTCHD1Q96NR3 888 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 S1PR5Q9H228 398 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms