RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 BTBD16Q32M84 506 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 AMZ1Q400G9 498 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 GID4Q8IVV7 300 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 OR9A4Q8NGU2 314 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 TRMT10AQ8TBZ6 339 aaKnown RBP12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 MARVELD1Q9BSK0 173 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 BEX1Q9HBH7 125 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 MCCC2Q9HCC0 563 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 ACOXLQ9NUZ1 547 aa12.42□□□□□ -0.42
GTF2F1-201ENST00000394456 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 PTP4A3O75365 173 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 TRAPPC2P0DI81 140 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 TRAPPC2BP0DI82 140 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 TLX1P31314 330 aaPredicted RBP12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 SF3A2Q15428 464 aaKnown RBP12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 FAM205BPQ63HN1 556 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 HBMQ6B0K9 141 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 MZT2BQ6NZ67 158 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 MZT2AQ6P582 158 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 NANOGNBQ7Z5D8 188 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 OR5M3Q8NGP4 307 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 NR4A3Q92570 626 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 GSDMCQ9BYG8 508 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 CYSLTR2Q9NS75 346 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 A0A0A6YYJ9 748 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 B4DGG1 531 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 THBS1P07996 1170 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 BMP8BP34820 402 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 MTNR1BP49286 362 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 DGCR2P98153 550 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 CRYZQ08257 329 aaKnown RBP12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 GAS6Q14393 721 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 FCN2Q15485 313 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 OAFQ86UD1 273 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 RSC1A1Q92681 617 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 RELTQ969Z4 430 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 ZFP3Q96NJ6 502 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 LMF1Q96S06 567 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 ZFYVE21Q9BQ24 234 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 ABCG5Q9H222 651 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 TRIM36Q9NQ86 728 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 MRPL15Q9P015 296 aaKnown RBP12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
GTF2F1-201ENST00000394456 TNFSF14O43557 240 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 BRINP1O60477 761 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 GPR75O95800 540 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 ATF1P18846 271 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 GZMKP49863 264 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 UBE2IP63279 158 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 MAT1AQ00266 395 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 EIPR1Q53HC9 387 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 EXOSC6Q5RKV6 272 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 TIGD4Q8IY51 512 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 CA13Q8N1Q1 262 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 METTL27Q8N6F8 245 aaPredicted RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 ZC3HAV1LQ96H79 300 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 SPACA7Q96KW9 195 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 PDCD1LG2Q9BQ51 273 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 POT1Q9NUX5 634 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 HCN3Q9P1Z3 774 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 SPAG17Q6Q759 2223 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 MT-ND5P03915 603 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 HTR2BP41595 481 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 CCR6P51684 374 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 RRAS2P62070 204 aaPredicted RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 POU6F2P78424 691 aaPredicted RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 PSG6Q00889 435 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 TMPRSS11FQ6ZWK6 438 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 GATSQ8NAP1 163 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 RERGQ96A58 199 aaPredicted RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 AHCYL2Q96HN2 611 aaKnown RBP12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 NDC1Q9BTX1 674 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 JAM3Q9BX67 310 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 CFAP54Q96N23 3096 aa12.4□□□□□ -0.42
GTF2F1-201ENST00000394456 A0A0B4J2E0 115 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A1B0GX12 115 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 C10orf142B7Z368 130 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 H3BSH0 61 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms