RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SLC1A3P43003 542 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 KCNJ5P48544 419 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 DIO1P49895 249 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 CTBP2P56545 445 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 DMTNQ08495 405 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 POU4F3Q15319 338 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 TRMT5Q32P41 509 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 FBXL19-AS1Q494R0 122 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 MMEL1Q495T6 779 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 PDSS1Q5T2R2 415 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ANKRD34AQ69YU3 496 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 REEP3Q6NUK4 255 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 FCRLAQ7L513 359 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 FAM214BQ7L5A3 538 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF550Q7Z398 422 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 NUFIP2Q7Z417 695 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM200AQ86VY9 491 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 TUSC5Q8IXB3 177 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SMYD1Q8NB12 490 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR10A6Q8NH74 314 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 CPNE4Q96A23 557 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 RCN3Q96D15 328 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 GMPPAQ96IJ6 420 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 LURAP1Q96LR2 239 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF300Q96RE9 604 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ELAC2Q9BQ52 826 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 GPATCH1Q9BRR8 931 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 PIGMQ9H3S5 423 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 KAT8Q9H7Z6 458 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 CACYBPQ9HB71 228 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SERINC1Q9NRX5 453 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 THUMPD1Q9NXG2 353 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 KLHL13Q9P2N7 655 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 GMPR2Q9P2T1 348 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 CHRNA9Q9UGM1 479 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ING1Q9UK53 422 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 PROCRQ9UNN8 238 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 GMEB1Q9Y692 573 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 CAPN7Q9Y6W3 813 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 PCNX1Q96RV3 2341 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARHGAP21Q5T5U3 1957 aa6.84□□□□□ -1.32
HMGB3P1-201ENST00000393368 TUBAL3A6NHL2 446 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 MSTNO14793 375 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 GCM2O75603 506 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 CRHP06850 196 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 CD8BP10966 210 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 IMPDH2P12268 514 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 POU2F1P14859 743 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 UQCRBP14927 111 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 ETS2P15036 469 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 DRD4P21917 467 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC6A2P23975 617 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 HTR2AP28223 471 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 SSTR2P30874 369 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 LSP1P33241 339 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 GZMMP51124 257 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 POLR2HP52434 150 aaKnown RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR2B6P58173 313 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 GNGT1P63211 74 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TSC22D1Q15714 1073 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRAMEF8Q5VWM4 474 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRAMEF7Q5VXH5 474 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 WBP2NLQ6ICG8 309 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 NANOGP8Q6NSW7 305 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMPPEQ6ZT21 453 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 C22orf34Q6ZV56 151 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 SPATA21Q7Z572 469 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 MTDHQ86UE4 582 aaKnown RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 P3H2Q8IVL5 708 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 CCDC103Q8IW40 242 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 C11orf65Q8NCR3 313 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 HIPK4Q8NE63 616 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR6K3Q8NGY3 331 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TSPEARQ8WU66 669 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PMM1Q92871 262 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 LRRC58Q96CX6 371 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 C14orf79Q96F83 325 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 LRRC46Q96FV0 321 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZC3HAV1LQ96H79 300 aaKnown RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 REXO5Q96IC2 774 aaKnown RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PSD2Q9BQI7 771 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 KLHL4Q9C0H6 718 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM38AQ9H6F2 299 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 NANOGQ9H9S0 305 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 MCCC2Q9HCC0 563 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 TIGARQ9NQ88 270 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PAQR5Q9NXK6 330 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 KLHL28Q9NXS3 571 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 KCNN3Q9UGI6 736 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF232Q9UNY5 417 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 CORO2BQ9UQ03 480 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 ANGPT4Q9Y264 503 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 IFT52Q9Y366 437 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 PDZD2O15018 2839 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 HCFC1P51610 2035 aa6.83□□□□□ -1.32
HMGB3P1-201ENST00000393368 CACNA1CQ13936 2221 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms