RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C6orf183Q5T699 404 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 LINC00114Q6XXX2 140 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
MKS1-202ENST00000393119 DYNC2LI1Q8TCX1 351 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 PMM1Q92871 262 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 ZNF426Q9BUY5 554 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 TRIM2Q9C040 744 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 SIGLEC7Q9Y286 467 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 EFCAB9A8MZ26 197 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 ZNF264O43296 627 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 CDC40O60508 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
MKS1-202ENST00000393119 TCEA1P23193 301 aaKnown RBP13.67□□□□□ -0.22
MKS1-202ENST00000393119 ITPKBP27987 946 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 VBP1P61758 197 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 MC2RQ01718 297 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 IL11RAQ14626 422 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 PGGHGQ32M88 737 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 C1QL3Q5VWW1 255 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 ULK3Q6PHR2 472 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 ZNF550Q7Z398 422 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 CYB561A3Q8NBI2 242 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 WDR36Q8NI36 951 aaKnown RBP13.67□□□□□ -0.22
MKS1-202ENST00000393119 DUSP19Q8WTR2 217 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 NR4A3Q92570 626 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 YIPF6Q96EC8 236 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
MKS1-202ENST00000393119 CDH10Q9Y6N8 788 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 ADAM10O14672 748 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
MKS1-202ENST00000393119 PPP1R3DO95685 299 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 TGFBR2P37173 567 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 MED22Q15528 200 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 SYT6Q5T7P8 510 aaPredicted RBP13.66□□□□□ -0.22
MKS1-202ENST00000393119 FAM198BQ6UWH4 519 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 FAM26EQ8N5C1 309 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 TMEM163Q8TC26 289 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 MYDGFQ969H8 173 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 TP53INP1Q96A56 240 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 MCCC2Q9HCC0 563 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 HINT3Q9NQE9 182 aaKnown RBP13.66□□□□□ -0.22
MKS1-202ENST00000393119 CFL2Q9Y281 166 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 BHLHE40O14503 412 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NDUFB5O43674 189 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 PTP4A3O75365 173 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NUDT14O95848 222 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 GYPBP06028 91 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NOS3P29474 1203 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 GAS1P54826 345 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NCS1P62166 190 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 INSM1Q01101 510 aaPredicted RBP13.66□□□□□ -0.22
MKS1-202ENST00000393119 EGR4Q05215 589 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 PLAG1Q6DJT9 500 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 PLBD1Q6P4A8 553 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 TIPARPQ7Z3E1 657 aaKnown RBP13.66□□□□□ -0.22
MKS1-202ENST00000393119 BMP8AQ7Z5Y6 402 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 OAFQ86UD1 273 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 SLC22A16Q86VW1 577 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 SLC34A3Q8N130 599 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 ZNF563Q8TA94 476 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NDNFQ8TB73 568 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 IFT27Q9BW83 186 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 SEC14L4Q9UDX3 406 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 PISDQ9UG56 409 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 ADAM18Q9Y3Q7 739 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 LOXL2Q9Y4K0 774 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 NPFFR2Q9Y5X5 522 aa13.66□□□□□ -0.22
MKS1-202ENST00000393119 A0A087WUJ7 227 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 FLRT2O43155 660 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SOX30O94993 753 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 GUSBP08236 651 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 CD40LGP29965 261 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 PSMD4P55036 377 aaKnown RBP13.65□□□□□ -0.22
MKS1-202ENST00000393119 COPZ1P61923 177 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 IRF3Q14653 427 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TIGD6Q17RP2 521 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TMEM201Q5SNT2 666 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 DHRS13Q6UX07 377 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TMPRSS11FQ6ZWK6 438 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 MRGPREQ86SM8 312 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 OR2T33Q8NG76 320 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 OR52I1Q8NGK6 324 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 OSTF1Q92882 214 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 ART5Q96L15 291 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 LPAR4Q99677 370 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 EDEM2Q9BV94 578 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SEMA4CQ9C0C4 833 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
MKS1-202ENST00000393119 MOV10Q9HCE1 1003 aaKnown RBP13.65□□□□□ -0.22
MKS1-202ENST00000393119 CCNB1IP1Q9NPC3 277 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 C14orf105Q9NVL8 296 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms