RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 C11orf88Q6PI97 169 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 RBMS3Q6XE24 437 aaKnown RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 GDF7Q7Z4P5 450 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 AMER3Q8N944 861 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 IL17FQ96PD4 163 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 RIOK2Q9BVS4 552 aaKnown RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 ZCCHC2Q9C0B9 1178 aaKnown RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 PITHD1Q9GZP4 211 aaPredicted RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 OR52D1Q9H346 318 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 ADGRL4Q9HBW9 690 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 TMEM138Q9NPI0 162 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 SLC13A4Q9UKG4 626 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 ANAPC1Q9H1A4 1944 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 FAM25EA8MYX2 175 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 PRKRAO75569 313 aaKnown RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 IFNA4P05014 189 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 SBK2P0C263 348 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 MAPK3P27361 379 aaPredicted RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 CD70P32970 193 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 RORAP35398 523 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 LUMP51884 338 aaPredicted RBP13.85□□□□□ -0.19
CTNS-202ENST00000381870 CBFBQ13951 182 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 TMEM69Q5SWH9 247 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 MBOAT2Q6ZWT7 520 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 C1orf216Q8TAB5 229 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 SMPDL3BQ92485 455 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 NRTNQ99748 197 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 ARHGDIGQ99819 225 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 DPH1Q9BZG8 443 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 POT1Q9NUX5 634 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 EPHA6Q9UF33 1036 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 FOXJ3Q9UPW0 622 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 PPIL1Q9Y3C6 166 aa13.85□□□□□ -0.19
CTNS-202ENST00000381870 TMEM200CA6NKL6 621 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 YKT6O15498 198 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 SSX5O60225 188 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 ARL6IP5O75915 188 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 HMGN2P05204 90 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 GYPBP06028 91 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 FOSL1P15407 271 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 RPL17P18621 184 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 DPP4P27487 766 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 KHKP50053 298 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTNS-202ENST00000381870 LMAN2Q12907 356 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 KRT33BQ14525 404 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 KHDRBS2Q5VWX1 349 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 TAS1R1Q7RTX1 841 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 OR2W3Q7Z3T1 314 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 ZNF433Q8N7K0 673 aaPredicted RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 OR1S2Q8NGQ3 325 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 TNFAIP8L1Q8WVP5 186 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 SLC41A3Q96GZ6 507 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 TMEM185BQ9H7F4 350 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 MYEF2Q9P2K5 600 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 ZNF230Q9UIE0 474 aaPredicted RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 GLOD5A6NK44 160 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 FGBP02675 491 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 ZNF806P0C7X5 589 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 HMGA1P17096 107 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 CD96P40200 585 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 MAGEB1P43366 347 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 DHRS7BQ6IAN0 325 aaPredicted RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 OVCH1Q7RTY7 1134 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 CFAP206Q8IYR0 622 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 OR6S1Q8NH40 331 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 SYNPRQ8TBG9 265 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 RXFP4Q8TDU9 374 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 AMDHD1Q96NU7 426 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 TRMT61BQ9BVS5 477 aaKnown RBP13.84□□□□□ -0.19
CTNS-202ENST00000381870 NRIP3Q9NQ35 241 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 LHX9Q9NQ69 397 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 INPP5EQ9NRR6 644 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 AHSPQ9NZD4 102 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 SPG21Q9NZD8 308 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 PCDHB10Q9UN67 800 aa13.84□□□□□ -0.19
CTNS-202ENST00000381870 TRBV23-1A0A0A0MS06 115 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 BHLHE40O14503 412 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CXCL14O95715 111 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CBR1P16152 277 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CDK2P24941 298 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 TEAD1P28347 426 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 BDKRB2P30411 391 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PTGFRP43088 359 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 NCBP2P52298 156 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTNS-202ENST00000381870 SNRPD1P62314 119 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 PPP2CBP62714 309 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PPP2CAP67775 309 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 AGERQ15109 404 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 ZNF750Q32MQ0 723 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 BEX5Q5H9J7 111 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 TMEM220Q6QAJ8 160 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms