RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 EPHA6Q9UF33 1036 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 U3KQ87 197 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TP53BP1Q12888 1972 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 PRKNO60260 465 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CLEC2LP0C7M8 214 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 FPR3P25089 353 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 EPHA4P54764 986 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 GRM7Q14831 915 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 OCLNQ16625 522 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 C19orf48Q6RUI8 117 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 SLC34A3Q8N130 599 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 FAM26EQ8N5C1 309 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF680Q8NEM1 530 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 DNAJA4Q8WW22 397 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CNOT9Q92600 299 aaKnown RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 MARC2Q969Z3 335 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 DHCR7Q9UBM7 475 aaKnown RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 A0A1W2PQL4 384 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 MYL12BO14950 172 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 APOL3O95236 402 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 MYL12AP19105 171 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 FUT1P19526 365 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CSF2RBP32927 897 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 GPR3P46089 330 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 MAP2K3P46734 347 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 ARL4DP49703 201 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 RRAS2P62070 204 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 RHAGQ02094 409 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 MAB21L1Q13394 359 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 AANATQ16613 207 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 POGLUT1Q8NBL1 392 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 RCBTB1Q8NDN9 531 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 C16orf52Q8NHV5 167 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 C9orf43Q8TAL5 461 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 FBXW5Q969U6 566 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CUTCQ9NTM9 273 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
CLCN4-201ENST00000380829 AUP1Q9Y679 476 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
CLCN4-201ENST00000380829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 FITM1A5D6W6 292 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 FABP7O15540 132 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 KLF4O43474 513 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ADAM11O75078 769 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ARSBP15848 533 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 EFNB1P98172 346 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 HNRNPA0Q13151 305 aaKnown RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ARSKQ6UWY0 536 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 FAM181AQ8N9Y4 354 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 OR4Q3Q8NH05 313 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ADAMTS18Q8TE60 1221 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 GRHL3Q8TE85 626 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 FGF11Q92914 225 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 OR10A5Q9H207 317 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 C20orf141Q9NUB4 165 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 SYNDIG1LA6NDD5 238 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF749O43361 778 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 PRAMEF2O60811 474 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 SERPINI2O75830 405 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 GIMD1P0DJR0 217 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 APEX1P27695 318 aaKnown RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 HSD17B7P56937 341 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 HSD11B2P80365 405 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 MEDAGQ5VYS4 303 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 LILRB1Q8NHL6 650 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-201ENST00000380829 TMEM163Q8TC26 289 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 PTCHD1Q96NR3 888 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 CD180Q99467 661 aa13.13□□□□□ -0.31
CLCN4-201ENST00000380829 BLACEA4D250 179 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 H0YIG0 161 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 BET1O15155 118 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 DUX1O43812 170 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 CDRT1O95170 752 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 HOXD4P09016 255 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-201ENST00000380829 CT45A8P0DMV1 189 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 CT45A9P0DMV2 189 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 STAT5AP42229 794 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 BTN1A1Q13410 526 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms