RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CBLCQ9ULV8 474 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 PPIL1Q9Y3C6 166 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 RPL36Q9Y3U8 105 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 HELZP42694 1942 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 FAM86C2PA6NEL3 165 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CREBL2O60519 120 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MOSPD3O75425 235 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CBR3O75828 277 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CLUP10909 449 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 ETFAP13804 333 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TNFRSF1BP20333 461 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 PSMB1P20618 241 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 OR1D2P34982 312 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 SOX18P35713 384 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 PTGER3P43115 390 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 STC1P52823 247 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 STXBP1P61764 594 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MRPS10P82664 201 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF385CQ66K41 422 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 LIN54Q6MZP7 749 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 SERPINA11Q86U17 422 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 DNAAF1Q8NEP3 725 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 Q8NFD4 153 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 OR4L1Q8NH43 312 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MAFIPQ8WZ33 124 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CLP1Q92989 425 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 RGMAQ96B86 450 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TAAR9Q96RI9 348 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 SEMA3CQ99985 751 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TMED9Q9BVK6 235 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TAS2R13Q9NYV9 303 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 GDF2Q9UK05 429 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 INSL5Q9Y5Q6 135 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MYO10Q9HD67 2058 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 DENND4CQ5VZ89 1909 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TRAPPC13A5PLN9 417 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM210A6NLX4 147 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF705EA8MWA4 302 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SULT2B1O00204 365 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 COCHO43405 550 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 KERAO60938 352 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ECI2O75521 394 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 RAB36O95755 333 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 F11P03951 625 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 OR4Q2P0C623 313 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 IGFBP6P24592 240 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GABRR2P28476 465 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GDNFP39905 211 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 AP3S2P59780 193 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SPIBQ01892 262 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TAP2Q03519 686 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SLC10A7Q0GE19 358 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GAGE1Q13065 139 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TDGQ13569 410 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TOMM34Q15785 309 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 DCAF12L2Q5VW00 463 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NCEH1Q6PIU2 408 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 C6orf120Q7Z4R8 191 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 THOC6Q86W42 341 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NPAS3Q8IXF0 933 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TRAM1L1Q8N609 369 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 THEM6Q8WUY1 208 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CPNE2Q96FN4 548 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GAL3ST4Q96RP7 486 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NRIP2Q9BQI9 281 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GINS4Q9BRT9 223 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MTIF3Q9H2K0 278 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MEPEQ9NQ76 525 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 RCC2Q9P258 522 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 OBSL1O75147 1896 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GSAPA4D1B5 854 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CD8B2A6NJW9 211 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 HEPACAM2A8MVW5 462 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 KLK8O60259 260 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GAAP10253 952 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CD8BP10966 210 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CORO1AP31146 461 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MMP15P51511 669 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SORDQ00796 357 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 DYRK1AQ13627 763 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ABRAXAS2Q15018 415 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NSUN5P2Q63ZY6 315 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 HBMQ6B0K9 141 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF813Q6ZN06 617 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 DPPA4Q7L190 304 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 C5orf24Q7Z6I8 188 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 OR6V1Q8N148 313 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 OR52B4Q8NGK2 314 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 BBS10Q8TAM1 723 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 STAG3L4Q8TBR4 150 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SPPL3Q8TCT6 385 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 HMGB4Q8WW32 186 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 EGFL8Q99944 293 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 FAIM2Q9BWQ8 316 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TBC1D17Q9HA65 648 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms