RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ATG4DQ86TL0 474 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 RBM45Q8IUH3 476 aaKnown RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 ATP6V1C2Q8NEY4 427 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 MBD3L2Q8NHZ7 208 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 DNAJA4Q8WW22 397 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 LZICQ8WZA0 190 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 OSTF1Q92882 214 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 ZNF845Q96IR2 970 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 MCHR1Q99705 422 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 TMEM27Q9HBJ8 222 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 SLC9A8Q9Y2E8 581 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 SH3GLB1Q9Y371 365 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 ZNF175Q9Y473 711 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 A0A1B0GWA3 101 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 SERPINA1P01009 418 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 CXCR1P25024 350 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 MSX2P35548 267 aaPredicted RBP16.82■□□□□ 0.28
SSU72-203ENST00000378725 EIF1AXP47813 144 aaKnown RBP16.82■□□□□ 0.28
SSU72-203ENST00000378725 SYT14P1Q58G82 188 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 ULK3Q6PHR2 472 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 CARM1Q86X55 608 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 RND1Q92730 232 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 FAM162AQ96A26 154 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 TPD52L3Q96J77 140 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 COQ10BQ9H8M1 238 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 DCAF13Q9NV06 445 aaKnown RBP16.82■□□□□ 0.28
SSU72-203ENST00000378725 RPS6KB2Q9UBS0 482 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 MAGEL2Q9UJ55 1249 aa16.82■□□□□ 0.28
SSU72-203ENST00000378725 A0A0B4J2E0 115 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 A0A1B0GX12 115 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 CXCL13O43927 109 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 ZG16O60844 167 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 GMNNO75496 209 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 ATP5HO75947 161 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 TGM6O95932 706 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 CCNA2P20248 432 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 TNFRSF1BP20333 461 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 AGAP20933 346 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 SMSP52788 366 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 RAC3P60763 192 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 NCALDP61601 193 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 BNIP2Q12982 314 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 SGCBQ16585 318 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 ZNF613Q6PF04 617 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 TMPPEQ6ZT21 453 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 OR10Q1Q8NGQ4 319 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 VANGL1Q8TAA9 524 aaPredicted RBP16.81■□□□□ 0.28
SSU72-203ENST00000378725 SSC4DQ8WTU2 575 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 ITLN2Q8WWU7 325 aaPredicted RBP16.81■□□□□ 0.28
SSU72-203ENST00000378725 SLC38A4Q969I6 547 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 DDIT4LQ96D03 193 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 TM9SF2Q99805 663 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 BTBD10Q9BSF8 475 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 POTEKPQ9BYX7 375 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 TIGARQ9NQ88 270 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 RPS6KA6Q9UK32 745 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 HDGFL3Q9Y3E1 203 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 MED12Q93074 2177 aa16.81■□□□□ 0.28
SSU72-203ENST00000378725 A0A0G2JNJ9 132 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 A0A1W2PNR3 127 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 SLC22A20A6NK97 555 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 GYG2O15488 501 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 NPIPB7O75200 414 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 RCBTB2O95199 551 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 RNF224P0DH78 156 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 PNMTP11086 282 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 SLC7A1P30825 629 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 OR1E2P47887 323 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 PON3Q15166 354 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 DNAL1Q4LDG9 190 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 ALG10BQ5I7T1 473 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 ENTPD8Q5MY95 495 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 SWT1Q5T5J6 900 aaKnown RBP16.8■□□□□ 0.28
SSU72-203ENST00000378725 PLXDC2Q6UX71 529 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 VTCN1Q7Z7D3 282 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 CPNE4Q96A23 557 aaPredicted RBP16.8■□□□□ 0.28
SSU72-203ENST00000378725 SLC47A1Q96FL8 570 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 OR5B2Q96R09 309 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 SRXN1Q9BYN0 137 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 OR11A1Q9GZK7 315 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 POLR2J2Q9GZM3 115 aaKnown RBP16.8■□□□□ 0.28
SSU72-203ENST00000378725 POLR2J3Q9H1A7 115 aaKnown RBP16.8■□□□□ 0.28
SSU72-203ENST00000378725 Q9UFV3 132 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 TRAPPC4Q9Y296 219 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 SNX13Q9Y5W8 968 aa16.8■□□□□ 0.28
SSU72-203ENST00000378725 A0A087WUJ7 227 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ZC3H12DA2A288 527 aaKnown RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 HSPB2A8KAH6 182 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 A8MVM7 634 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ARPC2O15144 300 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 PMS2P2O95744 297 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ZNF682O95780 498 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 IL2RAP01589 272 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 TFPIP10646 304 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 DIO1P49895 249 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 CDH12P55289 794 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 MYBPHQ13203 477 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 TRIM25Q14258 630 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms