RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CPMP14384 443 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 PRKAR1BP31321 381 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CAMLGP49069 296 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CXADRP78310 365 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 HOXC5Q00444 222 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 KIR2DS5Q14953 304 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 AWAT2Q6E213 333 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 FAM71E1Q6IPT2 247 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DHRS4L2Q6PKH6 230 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CELF2-AS1Q8N7Q2 184 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 C12orf76Q8N812 135 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 ZSCAN4Q8NAM6 433 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 TMEM185AQ8NFB2 350 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR2A12Q8NGT7 310 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 OR14K1Q8NGZ2 314 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 DYNC2LI1Q8TCX1 351 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 ASB17Q8WXJ9 295 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 RTP3Q9BQQ7 232 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 C11orf54Q9H0W9 315 aaPredicted RBP7.83□□□□□ -1.16
VPS36-201ENST00000378060 EDARQ9UNE0 448 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 CAMK2AQ9UQM7 478 aa7.83□□□□□ -1.16
VPS36-201ENST00000378060 A0A0D9SG52 128 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TCRBV5S2A0A599 114 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CSO75390 466 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 MT-ND4P03905 459 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 FBXO45P0C2W1 286 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 OR8U9P0C7N5 309 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 FPR3P25089 353 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PTPN6P29350 595 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ARRB2P32121 409 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 GALK2Q01415 458 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CDC20Q12834 499 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 C1orf61Q13536 156 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 RBMS2Q15434 407 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 NSDHLQ15738 373 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 UBE2NLQ5JXB2 153 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PHF19Q5T6S3 580 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 OTUD1Q5VV17 481 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 FCRLBQ6BAA4 426 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 C3orf33Q6P1S2 294 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 C1orf94Q6P1W5 598 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TSSK4Q6SA08 328 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CFAP77Q6ZQR2 320 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 RFPL4BQ6ZWI9 263 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TAS1R1Q7RTX1 841 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PLXDC1Q8IUK5 500 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 SERPINA12Q8IW75 414 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 LAS2Q8IYD9 372 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 EID2Q8N6I1 236 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CCDC71LQ8N9Z2 235 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ZBTB8AQ96BR9 441 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 S100PBPQ96BU1 408 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TGM7Q96PF1 710 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PFDN5Q99471 154 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 SLC25A18Q9H1K4 315 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 EMC7Q9NPA0 242 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 SIDT1Q9NXL6 827 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 UBE2J1Q9Y385 318 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 VWA8A3KMH1 1905 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 THBS2P35442 1172 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PSMB10P40306 273 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 AQP2P41181 271 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 DAP3P51398 398 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 PFN3P60673 137 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 RPS27AP62979 156 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 UBA52P62987 128 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 ERVK-25P63136 954 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CSNK2A1P68400 391 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 SIRPAP78324 504 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ESCO2Q56NI9 601 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CLVS2Q5SYC1 327 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CD300LGQ6UXG3 332 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TTLL10Q6ZVT0 673 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 GLB1L2Q8IW92 636 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 RIMKLAQ8IXN7 391 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 FAM26EQ8N5C1 309 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 CSNK2A3Q8NEV1 391 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 OR52I1Q8NGK6 324 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 MYLIPQ8WY64 445 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 NINJ1Q92982 152 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 DDIT4LQ96D03 193 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PDXPQ96GD0 296 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 MBOAT4Q96T53 435 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 LPAR4Q99677 370 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 WDR77Q9BQA1 342 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 GABARAPL3Q9BY60 117 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 METTL17Q9H7H0 456 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 ALKBH4Q9NXW9 302 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 GDE1Q9NZC3 331 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 MOKQ9UQ07 419 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ARID1BQ8NFD5 2236 aaPredicted RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 ANKRD33BA6NCL7 494 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 A8MVJ9 347 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ADAM12O43184 909 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 LATO43561 262 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TRAPPC6AO75865 159 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TCRBP04435 133 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 PROS1P07225 676 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TSFMP43897 325 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 XCR1P46094 333 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms