RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 KRT8P05787 483 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ADRA2AP08913 450 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 HIST1H1TP22492 207 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 IFNGR2P38484 337 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 CRYBB2P43320 205 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 RPS26P62854 115 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 RUNX1T1Q06455 604 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 HSPB3Q12988 150 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TMEM44Q2T9K0 475 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 BTBD16Q32M84 506 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ZNF468Q5VIY5 522 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 C1orf94Q6P1W5 598 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 IGFL3Q6UXB1 125 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 DEF8Q6ZN54 512 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 C16orf47Q6ZP98 133 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 QSOX2Q6ZRP7 698 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 CLDN22Q8N7P3 220 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 IL17RDQ8NFM7 739 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SLC7A13Q8TCU3 470 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ZNF486Q96H40 463 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 IL4I1Q96RQ9 567 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SERINC2Q96SA4 455 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 FNDC11Q9BVV2 318 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 PINK1Q9BXM7 581 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 PRRG3Q9BZD7 231 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 OR2B2Q9GZK3 357 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ROGDIQ9GZN7 287 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 OR51I1Q9H343 314 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SERHL2Q9H4I8 314 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ANKRD19PQ9H560 264 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 RNF167Q9H6Y7 350 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ANKRD10Q9NXR5 420 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TAS2R16Q9NYV7 291 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SSR3Q9UNL2 185 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 ATG4BQ9Y4P1 393 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 A0A0G2JPF8 293 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 HNRNPCL3B7ZW38 293 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TRAPPC2P0DI81 140 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TRAPPC2BP0DI82 140 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 NR2F1P10589 423 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 GTF2E2P29084 291 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 TSFMP43897 325 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 SMSP52788 366 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SLC26A5P58743 744 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 EFNB1P98172 346 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 CDK5Q00535 292 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SRSF1Q07955 248 aaKnown RBP eCLIP11.35□□□□□ -0.59
VRK3-202ENST00000377011 SLAMF1Q13291 335 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TP53BP2Q13625 1128 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 Q6ZS92 163 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SLC34A3Q8N130 599 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 CISD2Q8N5K1 135 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 OR56A1Q8NGH5 318 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 RAB8BQ92930 207 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 MIB2Q96AX9 1013 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 EXOSC8Q96B26 276 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 ANKRD9Q96BM1 317 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 AMDHD1Q96NU7 426 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SNX18Q96RF0 628 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 FGF20Q9NP95 211 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 SLC35C2Q9NQQ7 365 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 QPCTLQ9NXS2 382 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 DNAJC27Q9NZQ0 273 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TESQ9UGI8 421 aaKnown RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 NBPF19A0A087WUL8 3843 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 HIVEP3Q5T1R4 2406 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 TMEM129A0AVI4 362 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 FAM172BPA6NC97 362 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 GLOD5A6NK44 160 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 HRKO00198 91 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 FGF17O60258 216 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 WDPCPO95876 746 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 GAAP10253 952 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 CPEP16870 476 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 TNFSF8P32971 234 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 SSR2P43308 183 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 GPR143P51810 404 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 FOXK1P85037 733 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 RAB40BQ12829 278 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 MFAP5Q13361 173 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 TCEANCQ8N8B7 351 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 OR4D11Q8NGI4 311 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 PNPLA2Q96AD5 504 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 SNRNP40Q96DI7 357 aaKnown RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 SDHCQ99643 169 aaPredicted RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 HES7Q9BYE0 225 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 POLR2J2Q9GZM3 115 aaKnown RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 GLIPR2Q9H4G4 154 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 PRTFDC1Q9NRG1 225 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 TEX10Q9NXF1 929 aaPredicted RBP11.34□□□□□ -0.59
VRK3-202ENST00000377011 CALML5Q9NZT1 146 aa11.34□□□□□ -0.59
VRK3-202ENST00000377011 C5AR2Q9P296 337 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms