RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ITPKCQ96DU7 683 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 DIRAS2Q96HU8 199 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 MMACHCQ9Y4U1 282 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 CLCA3PQ9Y6N3 262 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 SBK2P0C263 348 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 SLC2A5P22732 501 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 CCR4P51679 360 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 AFF3P51826 1226 aaKnown RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 ZNF79Q15937 498 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 GDPD3Q7L5L3 318 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 TMEM151BQ8IW70 566 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 ZNF440Q8IYI8 595 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 LRRC17Q8N6Y2 441 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 Q8N9G6 341 aaPredicted RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 OR52E2Q8NGJ4 325 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 DNASE2BQ8WZ79 361 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 TSLPQ969D9 159 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 OR1F2PQ96R84 312 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 NDC1Q9BTX1 674 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 MIXL1Q9H2W2 232 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 ADGRL4Q9HBW9 690 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 UBQLN4Q9NRR5 601 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 MUTYHQ9UIF7 546 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 POLHQ9Y253 713 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 MN1Q10571 1320 aaPredicted RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 A0A1B0GVT2 93 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 LRRN3E7EW58 273 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 RNF13O43567 381 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 NUDT21O43809 227 aaKnown RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 MT-ND5P03915 603 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 RPL4P36578 427 aaKnown RBP18.55■□□□□ 0.56
VSX1-202ENST00000376709 GPR50Q13585 617 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 GPR135Q8IZ08 494 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 SDR9C7Q8NEX9 313 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 TMCO6Q96DC7 493 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 MVB12AQ96EY5 273 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 TIMP4Q99727 224 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 HOXD1Q9GZZ0 328 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 LRRN3Q9H3W5 708 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 SIT1Q9Y3P8 196 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 SEC16AO15027 2179 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 UNC13CQ8NB66 2214 aa18.55■□□□□ 0.56
VSX1-202ENST00000376709 ASXL3Q9C0F0 2248 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 C2orf92A0A1B0GVN3 265 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 FABP12A6NFH5 140 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 H3BMH7 237 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 PPM1BO75688 479 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 RORAP35398 523 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 PRAMEF17Q5VTA0 474 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 CCBE1Q6UXH8 406 aaPredicted RBP18.54■□□□□ 0.56
VSX1-202ENST00000376709 ZSCAN1Q8NBB4 408 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 OR4K13Q8NH42 304 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 PHOSPHO1Q8TCT1 267 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 SMPDL3BQ92485 455 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 C3orf49Q96BT1 292 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 SLC46A1Q96NT5 459 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 SRRQ9GZT4 340 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 KCNN2Q9H2S1 579 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 CHRNA9Q9UGM1 479 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 A8MU76 341 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 MCIDASD6RGH6 385 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 SCDO00767 359 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 RGS9O75916 674 aaPredicted RBP18.54■□□□□ 0.56
VSX1-202ENST00000376709 HIST1H1CP16403 213 aaKnown RBP18.54■□□□□ 0.56
VSX1-202ENST00000376709 PPICP45877 212 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 GPALPP1Q8IXQ4 340 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 OR5W2Q8NH69 310 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 OR1L3Q8NH93 324 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 NXF5Q9H1B4 397 aaKnown RBP18.54■□□□□ 0.56
VSX1-202ENST00000376709 TIGARQ9NQ88 270 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 COMMD3Q9UBI1 195 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 SERTAD3Q9UJW9 196 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 TBC1D24Q9ULP9 559 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 IER3IP1Q9Y5U9 82 aa18.54■□□□□ 0.56
VSX1-202ENST00000376709 GTPBP1O00178 669 aaKnown RBP18.53■□□□□ 0.56
VSX1-202ENST00000376709 UBL4AP11441 157 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 MYF5P13349 255 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 GALP22466 123 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 POU4F2Q12837 409 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 CD226Q15762 336 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 TSSK4Q6SA08 328 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 SLITRK4Q8IW52 837 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 SLC35F3Q8IY50 421 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 CARFQ8N187 725 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 SMAP2Q8WU79 429 aaPredicted RBP18.53■□□□□ 0.56
VSX1-202ENST00000376709 GAL3ST4Q96RP7 486 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 HAO2Q9NYQ3 351 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 ICAM5Q9UMF0 924 aa18.53■□□□□ 0.56
VSX1-202ENST00000376709 SIRT4Q9Y6E7 314 aaPredicted RBP18.53■□□□□ 0.56
VSX1-202ENST00000376709 ELOA3DA6NLF2 546 aaPredicted RBP18.52■□□□□ 0.56
VSX1-202ENST00000376709 NCR1O76036 304 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 IL33O95760 270 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 GAAP10253 952 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 GLB1P16278 677 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 ACTC1P68032 377 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 ACTA1P68133 377 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 CFHR1Q03591 330 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 BAK1Q16611 211 aa18.52■□□□□ 0.56
VSX1-202ENST00000376709 ELOA3BQ3SY89 546 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms