RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IL32P24001 234 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 CD38P28907 300 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 GCGRP47871 477 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 CTAG1AP78358 180 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 BTG2P78543 158 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 ELOCQ15369 112 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 CCDC85BQ15834 202 aaPredicted RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 CPOQ8IVL8 374 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 ZNF614Q8N883 585 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 FAM174AQ8TBP5 190 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 OTULINQ96BN8 352 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 TCTN2Q96GX1 697 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 GPR137Q96N19 417 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 NELL2Q99435 816 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 MARVELD1Q9BSK0 173 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 POLE3Q9NRF9 147 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 A0A1W2PR77 199 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 FAM183AA6NL82 134 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 FMO6PO60774 539 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 CTNSO60931 367 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 SPTBP11277 2137 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 CD27P26842 260 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 SSTR2P30874 369 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 TALDO1P37837 337 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 FASLGP48023 281 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 SMAD4Q13485 552 aaKnown RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 GALEQ14376 348 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 AANATQ16613 207 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 CNIH2Q6PI25 160 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 BRIX1Q8TDN6 353 aaKnown RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 CD180Q99467 661 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 TM9SF2Q99805 663 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 LMF2Q9BU23 707 aaKnown RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 TRAF4Q9BUZ4 470 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 INMT-MINDY4F8WBC2 141 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 SOCS6O14544 535 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 HPGDSO60760 199 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 SYPP08247 313 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 NME1P15531 152 aaKnown RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 FGFBP1Q14512 234 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 STK11Q15831 433 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 GRHL3Q8TE85 626 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 ARHGAP9Q9BRR9 750 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 DPCDQ9BVM2 203 aaPredicted RBP12.88□□□□□ -0.35
MSH5-202ENST00000375740 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 THADAQ6YHU6 1953 aa12.88□□□□□ -0.35
MSH5-202ENST00000375740 TBXA2RP21731 343 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 HTR1FP30939 366 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 SLC1A3P43003 542 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 CAPZBP47756 277 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 TPBGQ13641 420 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 TMEM44Q2T9K0 475 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 AMZ1Q400G9 498 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 GKN2Q86XP6 184 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 METTL27Q8N6F8 245 aaPredicted RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 BPIFA2Q96DR5 249 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 PTCHD1Q96NR3 888 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ZNF559Q9BR84 538 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 WACQ9BTA9 647 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ISYNA1Q9NPH2 558 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 PRTFDC1Q9NRG1 225 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 STK25O00506 426 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 HRO43593 1189 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ADAM11O75078 769 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 TRIM3O75382 744 aaPredicted RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 HOXD4P09016 255 aaPredicted RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 NAT2P11245 290 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 CTBP2P56545 445 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 FZD5Q13467 585 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 PLK5Q496M5 336 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms