RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SERPINA12Q8IW75 414 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF69Q9UC07 566 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ACOT7O00154 380 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 SOCS6O14544 535 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 CTSVO60911 334 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 RBBP9O75884 186 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 TRHRP34981 398 aaPredicted RBP16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 TRAM1Q15629 374 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF836Q6ZNA1 936 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 DUSP22Q9NRW4 184 aa16.64■□□□□ 0.25
PTPDC1-202ENST00000375360 BLACEA4D250 179 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 ALOX12BO75342 701 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 TCTN3Q6NUS6 607 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 MTFR2Q6P444 385 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 CCBE1Q6UXH8 406 aaPredicted RBP16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PLEK2Q9NYT0 353 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PCDHGB6Q9Y5F9 930 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PCDHGB2Q9Y5G2 931 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 HSPA12AO43301 675 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PGBD2Q6P3X8 592 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 OR5M11Q96RB7 305 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 BABAM2Q9NXR7 383 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 CNOT2Q9NZN8 540 aaKnown RBP16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 MMACHCQ9Y4U1 282 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 RTTNQ86VV8 2226 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 ASPDHA6ND91 283 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 SUSD5O60279 629 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PAPLNO95428 1278 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 LGI1O95970 557 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 LCATP04180 440 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 SNTB2Q13425 540 aaKnown RBP16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 ABCA11PQ4W5N1 156 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC25A25Q6KCM7 469 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF511Q8NB15 262 aa16.63■□□□□ 0.25
PTPDC1-202ENST00000375360 PRR35P0CG20 571 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 OR8G3PP0DMU2 310 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 GTF2F2P13984 249 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 NID1P14543 1247 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 SPCS2Q15005 226 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 PRSS41Q7RTY9 318 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 TMEM17Q86X19 198 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ZSCAN1Q8NBB4 408 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 OR2I1PQ8NGU4 316 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 THRSPQ92748 146 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF639Q9UID6 485 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 TMEM72A0PK05 275 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 CTDSP2O14595 271 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 NSA2O95478 260 aaKnown RBP16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 MAKP20794 623 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 EPHA2P29317 976 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 KDM4DQ6B0I6 523 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 FBXO42Q6P3S6 717 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF793Q6ZN11 406 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 FN3KQ9H479 309 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 GLB1P16278 677 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 IDUAP35475 653 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 MAGEA8P43361 318 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 PPP1CAP62136 330 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ELAVL1Q15717 326 aaKnown RBP16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 TBCEQ15813 527 aaPredicted RBP16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 C16orf52Q8NHV5 167 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 FCAMRQ8WWV6 532 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 DHRS1Q96LJ7 313 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 UBQLN3Q9H347 655 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 SYT7O43581 403 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ACP2P11117 423 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 FZD2Q14332 565 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 TMEM179BQ7Z7N9 219 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 UBALD2Q8IYN6 164 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ADGRF3Q8IZF5 1079 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 OR5T2Q8NGG2 359 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 PFN4Q8NHR9 129 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ITFG2Q969R8 447 aa16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 TP63Q9H3D4 680 aaPredicted RBP16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF701Q9NV72 531 aaPredicted RBP16.62■□□□□ 0.25
PTPDC1-202ENST00000375360 DOK2O60496 412 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 ARPC4P59998 168 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 NDUFA5Q16718 116 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 SPIN3Q5JUX0 258 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 BCL2L15Q5TBC7 163 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 RNF113BQ8IZP6 322 aaKnown RBP16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 RHOXF1Q8NHV9 184 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 OR51B6Q9H340 312 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 GPN2Q9H9Y4 310 aaPredicted RBP16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 TRPV4Q9HBA0 871 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 NBASA2RRP1 2371 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 A6NLC8 198 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 WDPCPO95876 746 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 UCHL1P09936 223 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 CLUP10909 449 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 PPP5CP53041 499 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 CA13Q8N1Q1 262 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 C15orf40Q8WUR7 153 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 SYT4Q9H2B2 425 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 ARRDC1-AS1Q9H2J1 176 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 SYNPO2LQ9H987 977 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 NLKQ9UBE8 527 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 ANKRD28O15084 1053 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms