RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CT45A8P0DMV1 189 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CT45A9P0DMV2 189 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF3P17036 446 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ARRB1P49407 418 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ATP12AP54707 1039 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CRYZQ08257 329 aaKnown RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ACSM1Q08AH1 577 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 FGFBP1Q14512 234 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF141Q15928 474 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SYT14Q8NB59 555 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ATP6V1C2Q8NEY4 427 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ASB15Q8WXK1 588 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 AHCYL2Q96HN2 611 aaKnown RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 TNFRSF13CQ96RJ3 184 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 COQ7Q99807 217 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 KATNB1Q9BVA0 655 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 HCAR1Q9BXC0 346 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SPRTNQ9H040 489 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ABCB9Q9NP78 766 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SLC35A3Q9Y2D2 325 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 MAU2Q9Y6X3 613 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CNOT1A5YKK6 2376 aaKnown RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SIGLEC6O43699 453 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 PTP4A3O75365 173 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CSTAP01040 98 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ALAS2P22557 587 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CD1CP29017 333 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SERTAD2Q14140 314 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 GRM7Q14831 915 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ARMC4Q5T2S8 1044 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 DDI2Q5TDH0 399 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 NKAIN2Q5VXU1 208 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 FAM131AQ6UXB0 335 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 BCORP1Q8N888 145 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 PTP4A1Q93096 173 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 CLIP3Q96DZ5 547 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ART5Q96L15 291 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF285Q96NJ3 590 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 TEAD3Q99594 435 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SDHCQ99643 169 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF649Q9BS31 505 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ALG8Q9BVK2 526 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ISG20L2Q9H9L3 353 aaKnown RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 EPHA6Q9UF33 1036 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 LMO7DNF2Z398 122 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 H0YIG0 161 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 J3QRE1 110 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 REM1O75628 298 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 PPP1R3DO95685 299 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 IFNGP01579 166 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF883P0CG24 379 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 PEPDP12955 493 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 HK1P19367 917 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 SLC6A6P31641 620 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 GABRA4P48169 554 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 ARL4DP49703 201 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 FUT7Q11130 342 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 KIRREL2Q6UWL6 708 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CMIPQ8IY22 773 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 OR4C3Q8NH37 302 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 NEIL3Q8TAT5 605 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 HPS1Q92902 700 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 SLC35B4Q969S0 331 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 TMCO6Q96DC7 493 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 DIRAS2Q96HU8 199 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 WDFY2Q96P53 400 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 PELOQ9BRX2 385 aaKnown RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 MKKSQ9NPJ1 570 aaPredicted RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 BABAM2Q9NXR7 383 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 PRODH2Q9UF12 536 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 TMEM184BQ9Y519 407 aaPredicted RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 V9GYH0 126 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 SERINC4A6NH21 518 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 EFCAB7A8K855 629 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 C17orf105B2RV13 164 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 GABRPO00591 440 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 NGFRP08138 427 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 HPGDP15428 266 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CSRP1P21291 193 aaKnown RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 AZGP1P25311 298 aaKnown RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 GPR143P51810 404 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CRMP1Q14194 572 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 KCNAB1Q14722 419 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 C14orf28Q4W4Y0 310 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
HMGCL-202ENST00000374487 TTLL10Q6ZVT0 673 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 TMEM99Q8N816 258 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CYB561A3Q8NBI2 242 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms