RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZCCHC12Q6PEW1 402 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 KCNRGQ8N5I3 272 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 WDSUB1Q8N9V3 476 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 OR10H4Q8NGA5 316 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ASB13Q8WXK3 278 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 WDR77Q9BQA1 342 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 MIEF1Q9NQG6 463 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 AK6Q9Y3D8 172 aaKnown RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 TMEM272A0A1B0GTI8 110 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ANTXRLA6NF34 631 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 IMPA2O14732 288 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 TXNL1O43396 289 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 CLDN11O75508 207 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 EPPINO95925 133 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 POMCP01189 267 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 KLK1P06870 262 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 IL3P08700 152 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 AGTR1P30556 359 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 NRG3P56975 720 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF177Q13360 481 aaPredicted RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 RAB33AQ14088 237 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 CDKN3Q16667 212 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 AGTRAPQ6RW13 159 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 RPTNQ6XPR3 784 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 C6orf120Q7Z4R8 191 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ADCK2Q7Z695 626 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 STX12Q86Y82 276 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 TNFAIP8L1Q8WVP5 186 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ZFPM2Q8WW38 1151 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 GHSRQ92847 366 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 EXOSC8Q96B26 276 aaKnown RBP11.96□□□□□ -0.5
PRPF4-201ENST00000374198 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 MOKQ9UQ07 419 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.5
PRPF4-201ENST00000374198 TRIOBPQ9H2D6 2365 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 OR6C76A6NM76 312 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 TGFB1P01137 390 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ALPPL2P10696 532 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 OMPP47874 163 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 P2RY4P51582 365 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 RHOAP61586 193 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 FABP9Q0Z7S8 132 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 CNTN1Q12860 1018 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PLBD1Q6P4A8 553 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 GID4Q8IVV7 300 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ZDHHC12Q96GR4 267 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 RBM14Q96PK6 669 aaKnown RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 MNTQ99583 582 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 TCF7L1Q9HCS4 588 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 TMEM138Q9NPI0 162 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 METTL1Q9UBP6 276 aaKnown RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 IL20RAQ9UHF4 553 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 KLF15Q9UIH9 416 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PRAMEF27A3QJZ7 478 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 B4GALT2O60909 372 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PRKRAO75569 313 aaKnown RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 NTN1O95631 604 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ACTL6AO96019 429 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 RLN1P04808 185 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF44P15621 663 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PTH2RP49190 550 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 P2RX1P51575 399 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 TAF10Q12962 218 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 GPNMBQ14956 572 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 DMKNQ6E0U4 476 aaPredicted RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 RAB12Q6IQ22 244 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 CBARPQ8N350 705 aaPredicted RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ZSCAN1Q8NBB4 408 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 SLC25A38Q96DW6 304 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 DERL3Q96Q80 235 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PFDN5Q99471 154 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
PRPF4-201ENST00000374198 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
PRPF4-201ENST00000374198 PLXNA3P51805 1871 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 C2orf74A8MZ97 194 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 J3QLW9 94 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 BCL2L11O43521 198 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF19P17023 458 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 ABCD3P28288 659 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 MNDAP41218 407 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 C9orf152Q5JTZ5 239 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 TPGS1Q6ZTW0 290 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms