RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 SERPINA1P01009 418 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 GLI4P10075 376 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 CCNA2P20248 432 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 TIMP3P35625 211 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 CLK1P49759 484 aaKnown RBP16.47■□□□□ 0.23
PBX3-202ENST00000373482 RASSF2P50749 326 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 TPD52P55327 224 aaPredicted RBP16.47■□□□□ 0.23
PBX3-202ENST00000373482 CARD18P57730 90 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 NUP107P57740 925 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 BNIP2Q12982 314 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 CTU2Q2VPK5 515 aaKnown RBP16.47■□□□□ 0.23
PBX3-202ENST00000373482 DNAL1Q4LDG9 190 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 PPP4R4Q6NUP7 873 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 CBLL1Q75N03 491 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 CARM1Q86X55 608 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 MARVELD2Q8N4S9 558 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 OR6T1Q8NGN1 323 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 OR10D3Q8NH80 312 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 SSC4DQ8WTU2 575 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 DNAJA4Q8WW22 397 aaPredicted RBP16.47■□□□□ 0.23
PBX3-202ENST00000373482 C3orf49Q96BT1 292 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 OR5B2Q96R09 309 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 UCN2Q96RP3 112 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 TM9SF2Q99805 663 aa16.47■□□□□ 0.23
PBX3-202ENST00000373482 GCN1Q92616 2671 aaKnown RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 CLEC18AA5D8T8 446 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 MBD3L4A6NDZ8 208 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 MBD3L3A6NE82 208 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 MBD3L5A6NJ08 208 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 SLC22A20A6NK97 555 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ELOA3DA6NLF2 546 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 CXCL13O43927 109 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ZG16O60844 167 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 SYNGR4O95473 234 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 LDLRP01130 860 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 HTR2AP28223 471 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 SHC1P29353 583 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 SRSF1Q07955 248 aaKnown RBP eCLIP16.46■□□□□ 0.23
PBX3-202ENST00000373482 BNIP1Q12981 228 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 CEACAM7Q14002 265 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 OR1Q1Q15612 314 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ELOA3BQ3SY89 546 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ALG10BQ5I7T1 473 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ULK3Q6PHR2 472 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 CLEC18BQ6UXF7 455 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 NCCRP1Q6ZVX7 275 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 FKBP9P1Q75LS8 142 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 CLEC18CQ8NCF0 446 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ELOA3Q8NG57 546 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 MBD3L2Q8NHZ7 208 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 OSTF1Q92882 214 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 WNT2BQ93097 391 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 CPNE4Q96A23 557 aaPredicted RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 SLC47A1Q96FL8 570 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 ADGRG7Q96K78 797 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 WFDC6Q9BQY6 131 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 PRRG4Q9BZD6 226 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 GORASP2Q9H8Y8 452 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 C12orf10Q9HB07 376 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 CLCF1Q9UBD9 225 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 MCTS1Q9ULC4 181 aaKnown RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.23
PBX3-202ENST00000373482 HDGFL3Q9Y3E1 203 aa16.46■□□□□ 0.23
PBX3-202ENST00000373482 A0A1B0GWA3 101 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 A0A1W2PNR3 127 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 TMEM72A0PK05 275 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 CPSF4LA6NMK7 179 aaKnown RBP16.45■□□□□ 0.22
PBX3-202ENST00000373482 PNMTP11086 282 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 FCGR2AP12318 317 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
PBX3-202ENST00000373482 CSNK2A1P68400 391 aaPredicted RBP16.45■□□□□ 0.22
PBX3-202ENST00000373482 ADORA2A-AS1P86434 159 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 PON3Q15166 354 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 FXNQ16595 210 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 ENTPD8Q5MY95 495 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 C6orf89Q6UWU4 347 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 ATG4DQ86TL0 474 aaPredicted RBP16.45■□□□□ 0.22
PBX3-202ENST00000373482 ZNF845Q96IR2 970 aaPredicted RBP16.45■□□□□ 0.22
PBX3-202ENST00000373482 ZFP3Q96NJ6 502 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 BTBD10Q9BSF8 475 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 PRR14Q9BWN1 585 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 ZNF175Q9Y473 711 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 SNX13Q9Y5W8 968 aa16.45■□□□□ 0.22
PBX3-202ENST00000373482 SPTBN1Q01082 2364 aaKnown RBP16.44■□□□□ 0.22
PBX3-202ENST00000373482 HSPB2A8KAH6 182 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 A8MVM7 634 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 KDM4EB2RXH2 506 aaPredicted RBP16.44■□□□□ 0.22
PBX3-202ENST00000373482 SULT2B1O00204 365 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 ARPC2O15144 300 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 TPST2O60704 377 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 OR1E2P47887 323 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 NPTX1Q15818 432 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 HSPB2Q16082 182 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 IFI44LQ53G44 452 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
PBX3-202ENST00000373482 OR2A2Q6IF42 318 aa16.44■□□□□ 0.22
PBX3-202ENST00000373482 ZNF613Q6PF04 617 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms