RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 TMEM204Q9BSN7 226 aa16.77■□□□□ 0.28
TMEM53-201ENST00000372235 NAA11Q9BSU3 229 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-201ENST00000372235 GSX2Q9BZM3 304 aa16.77■□□□□ 0.28
TMEM53-201ENST00000372235 SLC38A1Q9H2H9 487 aa16.77■□□□□ 0.28
TMEM53-201ENST00000372235 CTPS2Q9NRF8 586 aa16.77■□□□□ 0.28
TMEM53-201ENST00000372235 ZNF232Q9UNY5 417 aa16.77■□□□□ 0.28
TMEM53-201ENST00000372235 AKAP6Q13023 2319 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 IGHV3-15A0A0B4J1V0 119 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 HS3ST1O14792 307 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 CD3EP07766 207 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 PAX1P15863 534 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 RPS4Y1P22090 263 aaKnown RBP16.76■□□□□ 0.27
TMEM53-201ENST00000372235 SLC1A3P43003 542 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 POLR2JP52435 117 aaKnown RBP16.76■□□□□ 0.27
TMEM53-201ENST00000372235 STX1BP61266 288 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 COPZ1P61923 177 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 SLC35A1P78382 337 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 LIN52Q52LA3 116 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 AGBL2Q5U5Z8 902 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 ABLIM2Q6H8Q1 611 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 C22orf34Q6ZV56 151 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 ANKFN1Q8N957 763 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 ZG16BQ96DA0 208 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 INPP5KQ9BT40 448 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 PARPBPQ9NWS1 579 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 TMEM181Q9P2C4 612 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 NOSIPQ9Y314 301 aaKnown RBP16.76■□□□□ 0.27
TMEM53-201ENST00000372235 RNF115Q9Y4L5 304 aa16.76■□□□□ 0.27
TMEM53-201ENST00000372235 GSNP06396 782 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 CHRM4P08173 479 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 INHBBP09529 407 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 CDKN2CP42773 168 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 CRATP43155 626 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 CAPRIN1Q14444 709 aaKnown RBP16.75■□□□□ 0.27
TMEM53-201ENST00000372235 LARS2Q15031 903 aaKnown RBP16.75■□□□□ 0.27
TMEM53-201ENST00000372235 TIMM23BQ5SRD1 257 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 OLIG3Q7RTU3 272 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 ADGRG3Q86Y34 549 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 ZNF75CPQ92670 426 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-201ENST00000372235 APH1AQ96BI3 265 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 ZNF524Q96C55 264 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 RADILQ96JH8 1075 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 C7orf26Q96N11 449 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 ING1Q9UK53 422 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-201ENST00000372235 IFT52Q9Y366 437 aa16.75■□□□□ 0.27
TMEM53-201ENST00000372235 TMED7-TICAM2A0A0A6YYA0 188 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 FAM234BA2RU67 622 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 PRAMEF27A3QJZ7 478 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 ZNF814B7Z6K7 855 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 DIAPH2O60879 1101 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 MRPL33O75394 65 aaKnown RBP16.74■□□□□ 0.27
TMEM53-201ENST00000372235 GGT1P19440 569 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 SLC16A1P53985 500 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 DSTNP60981 165 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 TAB1Q15750 504 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 SLC9B1Q4ZJI4 515 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 NCMAPQ5T1S8 102 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 MRPL2Q5T653 305 aaKnown RBP16.74■□□□□ 0.27
TMEM53-201ENST00000372235 FBXW9Q5XUX1 488 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 YTHDF3Q7Z739 585 aaKnown RBP16.74■□□□□ 0.27
TMEM53-201ENST00000372235 PIF1Q9H611 641 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 TMEM45AQ9NWC5 275 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 TMED7Q9Y3B3 224 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 USH1CQ9Y6N9 552 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 HEATR5AQ86XA9 2040 aa16.74■□□□□ 0.27
TMEM53-201ENST00000372235 ITPR3Q14573 2671 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 A0A096LPI6 279 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 A0A0G2JPF8 293 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 HNRNPCL2B2RXH8 293 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 HNRNPCL3B7ZW38 293 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 POLR3GO15318 223 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 HNRNPCL1O60812 293 aaKnown RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 THBS1P07996 1170 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 HNRNPCL4P0DMR1 293 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 COX5AP20674 150 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 MRPL19P49406 292 aaKnown RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 OR2B6P58173 313 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 EPS8Q12929 822 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 FADDQ13158 208 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 PPA1Q15181 289 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 ETFDHQ16134 617 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 C6orf10Q5SRN2 563 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 RNF220Q5VTB9 566 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 PRAMEF8Q5VWM4 474 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 PRAMEF7Q5VXH5 474 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 OR7E24Q6IFN5 339 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 OR52P1PQ8NH57 321 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 PNPT1Q8TCS8 783 aaKnown RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 LRRC8CQ8TDW0 803 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 AKAP1Q92667 903 aaKnown RBP eCLIP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 SLC35B4Q969S0 331 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 FBXW5Q969U6 566 aa16.73■□□□□ 0.27
TMEM53-201ENST00000372235 TRMT61AQ96FX7 289 aaKnown RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 ZNF300Q96RE9 604 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-201ENST00000372235 FAIMQ9NVQ4 179 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms