RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MRPS18BQ9Y676 258 aaKnown RBP23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 CHCHD2Q9Y6H1 151 aaPredicted RBP23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 IGKV1D-42A0A075B6H8 117 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 IGLV3-32A0A0A0MS00 114 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 PTP4A3O75365 173 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 HMGN1P05114 100 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 FUT1P19526 365 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 PTGDSP41222 190 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 POLR2HP52434 150 aaKnown RBP23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 TMEM201Q5SNT2 666 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC25A30Q5SVS4 291 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 BICRALQ6AI39 1079 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 OR5M10Q6IEU7 315 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC30A6Q6NXT4 461 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 FAM26EQ8N5C1 309 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 ADAMTS17Q8TE56 1095 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 ST8SIA1Q92185 356 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 CPNE5Q9HCH3 593 aa23.94■■□□□ 1.42
ATPAF1-202ENST00000371937 C2orf72A6NCS6 295 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 MASP2O00187 686 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 MAN1A2O60476 641 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 PGGHGQ32M88 737 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 ZBED5Q49AG3 693 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 MEDAGQ5VYS4 303 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 RTL4Q6ZR62 310 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 FAM192AQ9GZU8 254 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 UBQLN3Q9H347 655 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 GPN2Q9H9Y4 310 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 NDUFA13Q9P0J0 144 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 IL17BQ9UHF5 180 aa23.93■■□□□ 1.42
ATPAF1-202ENST00000371937 GVINP1Q7Z2Y8 2422 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 CLCA1A8K7I4 914 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 TLX2O43763 284 aaPredicted RBP23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 ALDH3B2P48448 385 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 EFNB1P98172 346 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 ATP1A4Q13733 1029 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 OCLNQ16625 522 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 NADK2Q4G0N4 442 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 JMJD6Q6NYC1 403 aaPredicted RBP23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 KCTD8Q6ZWB6 473 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 SATL1Q86VE3 508 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 OR4Q3Q8NH05 313 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 OR51A7Q8NH64 312 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 SGCDQ92629 289 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 ASCL3Q9NQ33 180 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 MED17Q9NVC6 651 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 HPF1Q9NWY4 346 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 PSORS1C1Q9UIG5 152 aa23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 CNOT1A5YKK6 2376 aaKnown RBP23.92■■□□□ 1.42
ATPAF1-202ENST00000371937 TRAV27A0A087WT01 109 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC30A4O14863 429 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 PRKYO43930 277 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 HTR1AP08908 422 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 FXYD6P3P58550 94 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 SPARTQ8N0X7 666 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 CYP4Z2PQ8N1L4 340 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 MED11Q9P086 117 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 IL20RAQ9UHF4 553 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 ZNF337Q9Y3M9 751 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 RGS10O43665 173 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 OR7A10O76100 309 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 CH25HO95992 272 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 TMEM163Q8TC26 289 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 LIPHQ8WWY8 451 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 MYDGFQ969H8 173 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 PLEKHA8Q96JA3 519 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 SGCZQ96LD1 299 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 TNFRSF13CQ96RJ3 184 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 CCDC90BQ9GZT6 254 aa23.91■■□□□ 1.42
ATPAF1-202ENST00000371937 SMIM31A0A1B0GVY4 71 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 ENTPD6O75354 484 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC25A12O75746 678 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 EGR4Q05215 589 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 AHSA2Q719I0 299 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 LSRQ86X29 649 aaPredicted RBP23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 PAQR8Q8TEZ7 354 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 COPS4Q9BT78 406 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 AMBNQ9NP70 447 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 ERVK-18Q9QC07 812 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 BAIAP2Q9UQB8 552 aa23.9■■□□□ 1.42
ATPAF1-202ENST00000371937 FAM186AA6NE01 2351 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 TMED7-TICAM2A0A0A6YYA0 188 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 SURF4O15260 269 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 GRK5P34947 590 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 NUDT6P53370 316 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC22A10Q63ZE4 541 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 PRSS48Q7RTY5 328 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 SLC46A3Q7Z3Q1 461 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 LNX2Q8N448 690 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 SIRT6Q8N6T7 355 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 FRMD6Q96NE9 622 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 IFT27Q9BW83 186 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 MCCC2Q9HCC0 563 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 TMED7Q9Y3B3 224 aa23.89■■□□□ 1.42
ATPAF1-202ENST00000371937 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.89■■□□□ 1.41
ATPAF1-202ENST00000371937 BHLHE40O14503 412 aa23.89■■□□□ 1.41
ATPAF1-202ENST00000371937 DXOO77932 396 aaKnown RBP23.89■■□□□ 1.41
ATPAF1-202ENST00000371937 PRKCAP17252 672 aa23.89■■□□□ 1.41
ATPAF1-202ENST00000371937 SLC6A6P31641 620 aa23.89■■□□□ 1.41
ATPAF1-202ENST00000371937 ZNF41P51814 821 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms