RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 REEP3Q6NUK4 255 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ZCCHC12Q6PEW1 402 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 BHLHB9Q6PI77 547 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ENPP6Q6UWR7 440 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CCDC80Q76M96 950 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CPEB2Q7Z5Q1 589 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 HMGN2P46Q86SG4 172 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 AQP12AQ8IXF9 295 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 MORN4Q8NDC4 146 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PSD4Q8NDX1 1056 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TNIP2Q8NFZ5 429 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR7G1Q8NGA0 311 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR4N2Q8NGD1 307 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR52E4Q8NGH9 312 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR2Y1Q8NGV0 311 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR14A16Q8NHC5 309 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C16orf52Q8NHV5 167 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SLC26A7Q8TE54 656 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ABHD5Q8WTS1 349 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PIK3R3Q92569 461 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SLC9A6Q92581 669 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 NSMCE2Q96MF7 247 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ABHD1Q96SE0 405 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 LMF2Q9BU23 707 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 B3GNT4Q9C0J1 378 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PIGUQ9H490 435 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OLAHQ9NV23 265 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 GIN1Q9NXP7 522 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PPIEQ9UNP9 301 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 FARSAQ9Y285 508 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 HS3ST3B1Q9Y662 390 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CLCA3PQ9Y6N3 262 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 V9GYQ6 96 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PIEZO1Q92508 2521 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PCSK5Q92824 1860 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CENPVL1A0A0U1RR11 272 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 DHRS12A0PJE2 317 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SAGE2PA6NJ88 616 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TMEM200CA6NKL6 621 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 A8MV72 311 aaPredicted RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 SOCS6O14544 535 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TPST1O60507 370 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 RAD1O60671 282 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PRAMEF2O60811 474 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TSPAN9O75954 239 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 H6PDO95479 791 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OPN1SWP03999 348 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 BCHEP06276 602 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 FESP07332 822 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CELA2AP08217 269 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CYC1P08574 325 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SPARCP09486 303 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CT45A8P0DMV1 189 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CT45A9P0DMV2 189 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 LYL1P12980 280 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 HK1P19367 917 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CLCN2P51788 898 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CLRN1P58418 232 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SLC26A5P58743 744 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 HGFACQ04756 655 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ZNF155Q12901 538 aaPredicted RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 FOXL1Q12952 345 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 MRPL49Q13405 166 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 DNASE1L3Q13609 305 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TGIF1Q15583 401 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 NNATQ16517 81 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ARHGAP11BQ3KRB8 267 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 IQCCQ4KMZ1 466 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 LRRC23Q53EV4 343 aaPredicted RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 CYBRD1Q53TN4 286 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CT45A2Q5DJT8 189 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 GPR139Q6DWJ6 353 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 AAGABQ6PD74 315 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PAPD4Q6PIY7 484 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 KIRREL2Q6UWL6 708 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C16orf47Q6ZP98 133 aaPredicted RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 EIF3MQ7L2H7 374 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 TSEN54Q7Z6J9 526 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 VTCN1Q7Z7D3 282 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ADGRE4PQ86SQ3 457 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 COMTD1Q86VU5 262 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C9orf40Q8IXQ3 194 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CMTM4Q8IZR5 234 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 OR8H3Q8N146 312 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 METTL25Q8N6Q8 603 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C11orf44Q8N8P7 122 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ZNF441Q8N8Z8 693 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CDRT4Q8N9R6 151 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 APCDD1LQ8NCL9 501 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 PAPD5Q8NDF8 572 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 CHDHQ8NE62 594 aaPredicted RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 GPR32P1Q8NGA4 272 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 GPR151Q8TDV0 419 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C17orf50Q8WW18 174 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 METTL21AQ8WXB1 218 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 DAZLQ92904 295 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 NCLNQ969V3 563 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 FAM162AQ96A26 154 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ADIPOR1Q96A54 375 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 IMMP1LQ96LU5 166 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms