RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 DNAJA1P31689 397 aaKnown RBP18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 SLC1A3P43003 542 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 DIO1P49895 249 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 ZSWIM7Q19AV6 140 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 LIN52Q52LA3 116 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 CGB2Q6NT52 195 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 PPP4R4Q6NUP7 873 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 STAC2Q6ZMT1 411 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 NUFIP2Q7Z417 695 aaKnown RBP18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 TUSC5Q8IXB3 177 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 ZNF440Q8IYI8 595 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 ZNF563Q8TA94 476 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 ARL5BQ96KC2 179 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 OR5B2Q96R09 309 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 PSD2Q9BQI7 771 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 LIME1Q9H400 295 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 PLEKHF2Q9H8W4 249 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 NDRG3Q9UGV2 375 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 ZNF443Q9Y2A4 671 aaPredicted RBP18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 MED13LQ71F56 2210 aa18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 PRRC2AP48634 2157 aaKnown RBP18.28■□□□□ 0.52
SMNDC1-201ENST00000369592 CFAP73A6NFT4 308 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 DEFB108AA8MXU0 73 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 ZNF208O43345 1280 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 PGM3O95394 542 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 PMS2P2O95744 297 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 YES1P07947 543 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 HTR3AP46098 478 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 MAP2K6P52564 334 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 H3F3AP84243 136 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 ADRM1Q16186 407 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 ABLIM2Q6H8Q1 611 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 TFAP2EQ6VUC0 442 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 RETREG3Q86VR2 466 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 CPPED1Q9BRF8 314 aaPredicted RBP18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 SPATA9Q9BWV2 254 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 CCDC134Q9H6E4 229 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 HDGFL3Q9Y3E1 203 aa18.27■□□□□ 0.52
SMNDC1-201ENST00000369592 IGKV3D-15A0A087WSY6 115 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 IGHV3-15A0A0B4J1V0 119 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 DNPH1O43598 174 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 GCM2O75603 506 aaPredicted RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 ETS2P15036 469 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 PPIBP23284 216 aaKnown RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 LOXP28300 417 aaPredicted RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 POLR2HP52434 150 aaKnown RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 PDK3Q15120 406 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 RUNDC3AQ59EK9 446 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 MTDHQ86UE4 582 aaKnown RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 LSRQ86X29 649 aaPredicted RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 GABRG1Q8N1C3 465 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 BBS10Q8TAM1 723 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 SLC35B4Q969S0 331 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 TACO1Q9BSH4 297 aaKnown RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 OR11A1Q9GZK7 315 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 OR10A4Q9H209 315 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM38AQ9H6F2 299 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 TRIM33Q9UPN9 1127 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 TRAPPC4Q9Y296 219 aa18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 SPIN1Q9Y657 262 aaPredicted RBP18.26■□□□□ 0.51
SMNDC1-201ENST00000369592 TMED7-TICAM2A0A0A6YYA0 188 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 A0A0G2JND7 137 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM72A0PK05 275 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF724A8MTY0 619 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 SULT2B1O00204 365 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 THBDP07204 575 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 GKN3PP0CG01 181 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 PRG2P13727 222 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 NCF2P19878 526 aaPredicted RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 PSMB1P20618 241 aaKnown RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 CRYGSP22914 178 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 TACR3P29371 465 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 CSNK2A1P68400 391 aaPredicted RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 LARS2Q15031 903 aaKnown RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 BEND4Q6ZU67 534 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 NINJ1Q92982 152 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 REXO5Q96IC2 774 aaKnown RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 KLHL28Q9NXS3 571 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 KLHL9Q9P2J3 617 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 LEF1Q9UJU2 399 aaPredicted RBP18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 IFT52Q9Y366 437 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 TMED7Q9Y3B3 224 aa18.25■□□□□ 0.51
SMNDC1-201ENST00000369592 RAI1Q7Z5J4 1906 aaPredicted RBP18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF716A6NP11 495 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF814B7Z6K7 855 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 FESP07332 822 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 EDNRAP25101 427 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 RASGEF1BQ0VAM2 473 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM201Q5SNT2 666 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 GCNT6Q5T4J0 391 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 COMTD1Q86VU5 262 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM120AQ9BXJ8 343 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 FGFR1OP2Q9NVK5 253 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 ST6GALNAC2Q9UJ37 374 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF232Q9UNY5 417 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 NDUFAF1Q9Y375 327 aa18.24■□□□□ 0.51
SMNDC1-201ENST00000369592 ZC3H12DA2A288 527 aaKnown RBP18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM247A6NEH6 219 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 IMPDH2P12268 514 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 OR3A2P47893 321 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms