RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 HLA-DQA1Q5Y7H0 255 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 B3GNTL1Q67FW5 361 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 ISLR2Q6UXK2 745 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TMPRSS11FQ6ZWK6 438 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 THAP5Q7Z6K1 395 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 FJX1Q86VR8 437 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 LACC1Q8IV20 430 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TAGAPQ8N103 731 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 SLC5A8Q8N695 610 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 ST6GALNAC3Q8NDV1 305 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 ZNF555Q8NEP9 628 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 BRIX1Q8TDN6 353 aaKnown RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 LIPHQ8WWY8 451 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 RHOVQ96L33 236 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 MBOAT4Q96T53 435 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 MCHR1Q99705 422 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 WFDC6Q9BQY6 131 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 LAT2Q9GZY6 243 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TOR3AQ9H497 397 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 ZNF556Q9HAH1 456 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 KRCC1Q9NPI7 259 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 KRT84Q9NSB2 600 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 FBXO34Q9NWN3 711 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 UBAP1Q9NZ09 502 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TESMINQ9Y4I5 508 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 MAGED1Q9Y5V3 778 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 CSMD1Q96PZ7 3565 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 APCP25054 2843 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 A0A087WUU8 490 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 IGHV3-20A0A0C4DH32 117 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 OR2W5A6NFC9 320 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 TMEM200CA6NKL6 621 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 M0R3H8 397 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ADAM10O14672 748 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 HS6ST1O60243 411 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PPM1BO75688 479 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 DIRAS1O95057 198 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 HPP00738 406 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 COX6A1P12074 109 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 OSMP13725 252 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 TNFRSF1BP20333 461 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 FPR3P25089 353 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ABCD3P28288 659 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ARG2P78540 354 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 TSPAN31Q12999 210 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 MFAP5Q13361 173 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 SNTA1Q13424 505 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PCOLCEQ15113 449 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 RBM48Q5RL73 367 aaKnown RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 C6orf52Q5T4I8 152 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 CCNJQ5T5M9 372 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ZNF691Q5VV52 312 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 RPL13AP3Q6NVV1 102 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 H3F3CQ6NXT2 135 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PGBD2Q6P3X8 592 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ULK3Q6PHR2 472 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 FIGNL1Q6PIW4 674 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 FAM180AQ6UWF9 173 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 IGFL2Q6UWQ7 119 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 C5orf46Q6UWT4 87 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 RASSF6Q6ZTQ3 369 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 LANCL3Q6ZV70 420 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 MBOAT2Q6ZWT7 520 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 NDUFAF7Q7L592 441 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 WDR53Q7Z5U6 358 aaPredicted RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 ZAR1Q86SH2 424 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 RBM45Q8IUH3 476 aaKnown RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 C8orf59Q8N0T1 100 aaPredicted RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 ATG16L2Q8NAA4 619 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 OR4N2Q8NGD1 307 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 OR4C3Q8NH37 302 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 FAR1Q8WVX9 515 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PSMF1Q92530 271 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 HDAC2Q92769 488 aaKnown RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 BARD1Q99728 777 aaKnown RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 APOL4Q9BPW4 351 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PRSS27Q9BQR3 290 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 QRSL1Q9H0R6 528 aaKnown RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 SMURF2Q9HAU4 748 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 TMEM27Q9HBJ8 222 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 PLCXD1Q9NUJ7 323 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 IL20Q9NYY1 176 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 MYOTQ9UBF9 498 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 REV1Q9UBZ9 1251 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 SH3BGRL2Q9UJC5 107 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 ICAM5Q9UMF0 924 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 TMEM5Q9Y2B1 443 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 U3KQV3 271 aa8.01□□□□□ -1.13
SNX27-201ENST00000368838 NCOA6Q14686 2063 aaPredicted RBP8.01□□□□□ -1.13
SNX27-201ENST00000368838 NSG1A0A0A6YYJ2 146 aa8□□□□□ -1.13
SNX27-201ENST00000368838 TRBV4-1A0A0J9YWV2 114 aa8□□□□□ -1.13
SNX27-201ENST00000368838 CENPVL1A0A0U1RR11 272 aa8□□□□□ -1.13
SNX27-201ENST00000368838 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
SNX27-201ENST00000368838 ZAR1LA6NP61 321 aa8□□□□□ -1.13
SNX27-201ENST00000368838 J3KTA2 159 aa8□□□□□ -1.13
SNX27-201ENST00000368838 SCDO00767 359 aa8□□□□□ -1.13
SNX27-201ENST00000368838 ZNF264O43296 627 aa8□□□□□ -1.13
SNX27-201ENST00000368838 FZD7O75084 574 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms